Protein Model on 7cwn_A_1_L_1 (TEMPLATE: 7cwn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS2) A 1 (A) polymer(polypeptide(L)) [1072 aa] Spike glycoprotein :SPIKE_SARS2
2 b L 1 (G) polymer(polypeptide(L)) [120 aa] heavy chain of P17 Fab 455L 470T 471E 481N 482G 483V 484E 489Y 490F 492L 493Q (identity: 100.0 %/94.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cwn_A_1 identity=94.5%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :****************************************************************************************************:
7cwn_A_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :          S   EEEESS  EE   S    S EEEEEEEE  SSEEEEEEEEEEE SSS  EEE    EE  S EEEEE  SS  EEEE  BSSSSSS:    
ExpBur          :eeeeeeeeeeeeeeebebebbbbbebeeeeeeeeeeeeeebbbbbeeebbbbbbbeeeeeeeeeebebeebebeebbbbbbebeeebbbbbbbbeebbee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7cwn_A_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEE    SS B  EEEEEEE SS  EEEEE SSTT EEEEGGGTEEEEEEEEEE  BS SS     SSSS TTEEEEEEEEETTEEEEEEEEE   SS:    
ExpBur          :bebbbbbbeeeebbbebbebebbebbbbbbeeeeeeeeeebbeeebbeeeeeeeeeeeeebbbeeeeeeebeeebbbbbbbbbeeeebbbbbeeeebeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**************************************    **********************************************************:
7cwn_A_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPXXXXSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS  S   EEEEEEEEE      EE EEEEE    S  ----     S EEEEEEE EEEEEEEE  TTS    EEESTTSTTTTTTTTS  SS  SEEE:    
ExpBur          :eebeeeebbbeeebebebebebeebbbbbbbeeeeeee----eeebeeebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeebebeebee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :*****************   ********************************************************************************:
7cwn_A_1     314:QTSNFRVQPTESIVRFPXXXNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EEEEEE     EEEE  ---    HHHHTT S    STT EEEEE SB   HHHHHHH   SEEE  SS TTGGGTS BS EEEEEEEE TTGGGT STT:    
ExpBur          :ebeeeebeeeeebebee---eebebeebbeeeebebbeebeeeebeebebebeebeeeeeeeeeebeeeeeeebeeeebbbbebbbbbbebebbeebbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7cwn_A_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SHHHHHT    SS   EEEE B TTTSS TT B   EEE   SS   TT        EESSSS  TTS  SSEE SEEE  B TTS GGG  EEEEEE:    
ExpBur          :bebebbbbbbebbeebebbbbbbebbeebbeeebbeebebbeeeeeebeebeebeeeebbeeeeeebeeeeeeebeebbeebebbeeeeeeebbbbbbbb:    
Contact         :                                         b              bb         bbbb    bb bb                    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :**************   ***********************************************************************************:
7cwn_A_1     514:SFELLHAPATVCGPXXXTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :E    SS   B   ---     SSEEEEEETTEEEEEEEEE      TT  B   TTS   EEE SSS  EEEEE   EEEEEEEES TTT S  EEEEE:    
ExpBur          :bbbeeeeeeebebe---eebbeeebbebbbeebeeebebbebeeebeeeeeebeeeeeeeebbbbbeeeebbebeebeebbbbbbbbbbeebeeebbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    ************************************            *************************:
7cwn_A_1     614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T  SS  -------------------- EEE SSEEEES EE SS  B SEEEETTEEE S  ------------    EEEE B S        TTEEE:    
ExpBur          :ebeeeee--------------------eeeebeebbbeebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7cwn_A_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :EE  EEEEEEEEEEE     EEE HHHHHS S HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  SSS   TTTS  TTSSS:    
ExpBur          :bbbebebebeebbbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeebeeeeeeebeebebeebbeeeeeee:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :**************                    ******************************************************************:
7cwn_A_1     814:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :   HHHHHHHHH  -------------------- TTTHHHHTTEEE   SS HHHHHHHHHHHHHHHHHHTTGGGSSS     HHHHHHHHHHHHT  T:    
ExpBur          :eebebbbbbbeebe--------------------eeeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :****************************************************************************************************:
7cwn_A_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHHHT SSTTHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebbeebeeeeeebeebeebbeebbebbeebeeebeeeeebeeeebeebbeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7cwn_A_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHTTTS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS   E:    
ExpBur          :bbeebeebbeebbebbeebbbeebeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebebbbeeeebbbbbebbbeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7cwn_A_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          :E BGGGEEEES TTTSTT EE   B SHHHHH  :    
ExpBur          :ebbeeebeeeeebeeeeebeeeebeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123