Protein Model on 4lvn_A_1_F_1 (TEMPLATE: 4lvn )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(FURIN_HUMAN) A 1 (A) polymer(polypeptide(L)) [336 aa] Subtilisin-like serine protease :Q868D6_PLAFA
2 b F 1 (A) non-polymer(CA) CALCIUM ION 162D 205V(I) 208N 210V(I) 212G(V) (identity: 40.0 %/26.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4lvn_A_1 identity=26.9%
queryA       149:VSILDDGIEKNHPDLAGNYDP-----------------------GASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVR: 225
                :    * **  *****  *                          ** *  *   *        * ** ***   *   *  **    ***  *       :
4lvn_A_1      41:ICVIDSGIDYNHPDLKDNIELNLKELHGRKGFDDDNNGIVDDIYGANFVNNSGNP--------MDDNYHGTHVSGIISAIGNNNIGVVGVDVNSKLIICK: 132
SecStr          :EEEEES B TT TTTGGGB   HHHHTS TTS TT SS TT SSEEETTTTBS  --------B SSSHHHHHHHHHH  SSSSSS   SSTT EEEEEE:    
ExpBur          :bbbbbbbbbbebebbeebbeebeebeeeeeeeeebebebeebeebbbbeeebeeb--------ebeeebbbbbbbbbbbbeeeeebbbbbbbebbbbbbb:    
Contact         :             b                                                                 b  b b b             

queryA       226:MLD----GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSC----NCDGYTNSIY----: 313
                : **    *   *           *  *    *                                *  *     *      *      **   *  *    :
4lvn_A_1     133:ALDEHKLGRLGDMFKCLDYCISRN-AHMINGSFSFDEYSGIFNSSVEYLQRK------------GILFFVSASNCSHPKSSTPDIRKCDLSINAKYPPIL: 219
SecStr          : B TTS B HHHHHHHHHHHHHTT- SEEEE   BSS  HHHHHHHHHHHHT------------T EEEEE  B    SSSS  GGGGBTTTS  BTGGG:    
ExpBur          :bbeeeeeeeeebbeebbebbeebe-bebbbbbbebeeebeebbeebeebeee------------ebbbbbbbbebebeeeeeeeeeebbbeeeebbbbbb:    

queryA       314:------TLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLV: 397
                :        *        *   **    *     *         *  *           ***  **  * *  *    *  *         :
4lvn_A_1     220:STVYDNVISVANLKKNDNNNHYSLSINSFYSNKYCQLAAPGTNIYST-APHNSYRKLNGTSMAAPHVAAIASLIFSINPDLSYKKVIQIL: 308
SecStr          :GGT TTEEEEEEEEE SSSS EEE TTB BBTTT  EEEE SSEEEE-ETTTEEEEE SHHHHHHHHHHHHHHHHHH TT  HHHHHHHH:    
ExpBur          :beebebbbbbbbbeeeeeeeebebbeebbbbeeebbbbbbbbebebb-bbeeebeebebbbbbbbbbbbbbbbbbbbbeebebeebbebb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123