Protein Model on 1ot5_B_1_D_1 (TEMPLATE: 1ot5 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(FURIN_HUMAN) B 1 (B) polymer(polypeptide(L)) [477 aa] Kexin :KEX2_YEAST
2 b D 1 (D) polymer(polypeptide(L)) [4 aa] Ac-Ala-Lys-boroArg N-acetylated boronic acid peptide inhibitor 154D 191D 194H 227L 253S 254W 255G 256P 258D 292A 293S 294G 295N 306D 309T 365T(G) 367T 368S (identity: 94.4 %/42.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1ot5_B_1 identity=42.2%
queryA       115:DPKFPQQWYLSGVT--QRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCG: 212
                :** *  ** *        * **   *    ** * *  * ***      **  *     * * **    * **     *  ******** **   *  **:
1ot5_B_1      13:DPLFERQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPR---LSDDYHGTRCAGEIAAKKGNNFCG: 109
SecStr          : GGGGG TTTS SSSTT S   HHHHTTT S TT EEEEEES   TTSTTTTTTB STT EESSSSSS     ---STTTTHHHHHHHHHH  SSSSSS :    
ExpBur          :bebbeebbbbbbeeeeebbbebbebbeeebbbeebbbbbbbbbbbbebebbeebbbeebbebbbeeeeebeee---eeebebbbbbbbbbbbeeeeeebb:    
Contact         :                                         b                                    b  b                  

queryA       213:VGVAYNARIGGVRMLDGEVTDAVEARSL--GLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTN: 310
                :*** *** * * * * *  *   ** **  **  *   *** **** ***    **  *   *   **  **   * * * ******   * ** *****:
1ot5_B_1     110:VGVGYNAKISGIRILSGDITTEDEAASLIYGLDVN--DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTN: 207
SecStr          :  TTTTSEEEEEE SSS   HHHHHHHTTTTTTT -- EEEE   S  SS   B   HHHHHHHHHHHHHHHHHT  EEEEE  S TTTT  GGGBTTTT:    
ExpBur          :bbbbbebebbbbbbebeeeeeeebbebbeeebebb--bbbbbbbebeeebeeeeebeeebeebbeebbeebbeeebbbbbbbbbebeeeebbbbbbbbbb:    
Contact         :              b                           bbbb b                                 bbbb          b  b 

queryA       311:SIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNAN-: 409
                :***   *         * *** **   * *****      *   *    *  ** **** ******   * **** ****** * *          **  :
1ot5_B_1     208:SIYSITIGAIDHKDLHPPYSEGCSAVMAVTYSSGSG--EYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADG: 305
SecStr          :STTEEEEEEE TTS   TTS   TTEEEEEE SBTT--B EEEE STT EEEEE SHHHHHHHHHHHHHHHHHH TT  HHHHHHHHHHH B  TT GGG:    
ExpBur          :bbbbbbbbbbbbebebbebbbebbbbbbbbbbbeee--eebbbbbbeeeebeebebbbbbbbbbbbbbbbbbeebeebebbbbbbbbbebbeebeebeeb:    
Contact         :                                                      b bb                                          

queryA       410:DWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIG---KRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLV: 506
                :**     * * ** ** *  **         *  *  *       *            **   *            * **           **     * :
1ot5_B_1     306:DWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWENVNAQTWFYLPTLYVSQSTNSTEETLESVITISEKSLQDANFKRIEHVTVTVDIDTEIRGTTTVDLI: 405
SecStr          :  B  SSSS BBTTTBT B  HHHHHHHHTT      EEEEE   EEEEEEE  TT  EEEEEEE HHHHHHTTEEEEEEEEEEEEEEESSGGGEEEEEE:    
ExpBur          :ebeebebeeebbbebbbbbbbbeebbeebeeeeebeebbebebeeeebeeebebeeeebebebebeeeebeeebbeebbbbbbbbbbebeebbbbbbbbe:    

queryA       507:SPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYG: 572
                :** *  * *   ** * *  ** ** **    * *   * *      * *           * * *:
1ot5_B_1     406:SPAGIISNLGVVRPRDVSSEGFKDWTFMSVAHWGENGVGDWKIKVK-TTENGHRIDFHSWRLKLFG: 470
SecStr          : TT  EEEEE   TT   SS EEEEEEEE TTTT    EEEEEEEE-ESSTT  EEEEEEEEEEEE:    
ExpBur          :beeebebebbeebeebeeeebbeebebbbbbbbebebeeebebebe-beeeeeebebebbebbbbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123