#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7k43_D_1_C_1

Protein Model on 7k43_D_1_C_1 (TEMPLATE: 7k43 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) D 1 (B) polymer(polypeptide(L)) [1034 aa] Spike glycoprotein :SPIKE_SARS2
2 b C 1 (L) polymer(polypeptide(L)) [105 aa] S2M11 Fab fragment (light chain) 440N 441L (identity: 100.0 %/91.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7k43_D_1 identity=91.7%
queryA        15:CVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKT: 114
                :****************************************************           *************************************:
7k43_D_1      34:CVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHXXXXXXXXXXXRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKT: 133
SecStr          :            EEEE TT  EE  SS    SEEEEEEEEE  TT EEEEE -----------     EEE  SEEEEEEEESS  EEEEEEESS BSSS:    
ExpBur          :eeebeeeeeeeeeebebeebbbbbbeeeeeeeeeeebeebbbbbebebebbe-----------ebebeebebeebbbbbbbbeebbbbbbbbbeebeeee:    

queryA       115:QSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVR: 214
                :*****************************        *****************************    ******************************:
7k43_D_1     134:QSLLIVNNATNVVIKVCEFQFCNDPFLGVXXXXXXXXWMESEFRVYSSANNCTFEYVSQPFLMDLEXXXXNFKNLREFVFKNIDGYFKIYSKHTPINLVR: 233
SecStr          :  EEEEE SS EEEE SEEEEEEEEEE  --------     EEEEEEEE    EEE         ----   EEEEEEEEEETTEEEEEEEEEE   SS:    
ExpBur          :ebbbbbeeeebebbebbbbebbebbbbbe--------eeeeeeebeeeeeeeeeeeebeeeebebe----ebeebebbbbbeeeeebebbeeebebeeee:    

queryA       215:DLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQ: 314
                :*****************************              *********************************************************:
7k43_D_1     234:DLPQGFSALEPLVDLPIGINITRFQTLLAXXXXXXXXXXXXXXWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQ: 333
SecStr          :    S  EEEEEEEE      SEEEEEE --------------    SEEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHTTSS   SEEEE:    
ExpBur          :ebeeeebbbeeeeebebebebeebbbbbb--------------eeeeebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeebebeebebe:    

queryA       315:TSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQ: 414
                :****************************************************************************************************:
7k43_D_1     334:TSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQ: 433
SecStr          :EEEEE    EEEEE      B TTHHHHT S   BGGG EEEEE SEE   HHHHS SS SEEEEESS TTSGGG EESEEEEEEEEEEGGGGGGSSTT :    
ExpBur          :beebeeeeeeebbbbeeeeeebebeebbeeeebbbbbbbeeeebeebbbebeebeeeeeeebbebeebeeeebeeebbbbbebbbbbbbbebbebbbeee:    

queryA       415:TGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLS: 514
                :****************************************************************************************************:
7k43_D_1     434:TGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLS: 533
SecStr          : SHHHHHT    TT  EEEEEEE HHHH  SS B   EEE   SS   TT        EE SSS  TT  BTTEE SEEE  B TTS GGGSEEEEEEEE:    
ExpBur          :eeebbbbbbbbbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeebeeeebeeeeeeebeeeeeeebeebbebbebeeeeeebebbbbbbbbb:    
Contact         :                         bb                                                                         

queryA       515:FELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQD: 614
                :****************************************************************************************************:
7k43_D_1     534:FELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQD: 633
SecStr          :EE  SS   EE S        SSEEEEEETTEEEEEEEEE      TT  EEE TTS EEEEE SSS  EEEEE   EEEEEEEE  TTT S  EEEEET:    
ExpBur          :beeeeeebbbbbeeeeeeebeeebbebbbbeeeeebbbeebeeebeeeeeebeeeeeeebbbbbeeeeebbbbeebeebbbbbbbbbeeebeebbbbeee:    

queryA       615:VNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAI: 714
                :*******                   ***********************************              *************************:
7k43_D_1     634:VNCTEVPXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQXXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIAI: 733
SecStr          :  TTT  ------------------- EEEETTEEEES EE S     SEEEETTEEEEE --------------  EEEEE            TTEEE :    
ExpBur          :bebeebe-------------------eebebeebbbeebeebeeeeeeebebeeebbbbee--------------eebbbbeeeeeeeeeeeeeeeeeeb:    

queryA       715:PTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK: 814
                :****************************************************************************************************:
7k43_D_1     734:PTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK: 833
SecStr          : S EEEEEEEEEEE    EEEE HHHHHHTT HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS   TT   TTTSB TTSSS :    
ExpBur          :eeebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbeebeeebeeeeeeebeebebebbbeeeeeebe:    

queryA       815:RSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQN: 914
                :************                      ******************************************************************:
7k43_D_1     834:RSFIEDLLFNKVXXXXXXXXXXXXXXXXXXXXXXLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQN: 933
SecStr          : BHHHHHHHHH ---------------------- HHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHHTTGGGSSS     HHHHHHHHHHHTT  HH:    
ExpBur          :bbebbbbbbeee----------------------eeeebeeebbeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeebebbebbbebbeebebeee:    

queryA       915:VLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIR:1014
                :***********************************************************************  ***************************:
7k43_D_1     934:VLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIR:1033
SecStr          :HHHHTHHHHHHHHHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbeeeeeebbebbeebbeebeeebeeeeeebeebeebeeebeebbeebbeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebeeb:    

queryA      1015:AAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQI:1114
                :****************************************************************************************************:
7k43_D_1    1034:AAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQI:1133
SecStr          :HHHHHHHHHHHHHHHHHHTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEE S  EEEEES EESSSEEEEESSSEEEESSS EEEE TTS   EE:    
ExpBur          :beebeebbeebbebbeebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbbeeeebbbbbeebbbeee:    

queryA      1115:ITTDNTFVSGNCDVVIGIVNNTVYDP:1140
                :**************************:
7k43_D_1    1134:ITTDNTFVSGNCDVVIGIVNNTVYDP:1159
SecStr          : BTTSEEEEEETTT TT EE   B  :    
ExpBur          :bbeebbeeeeebeebeeeeeeebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123