#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7jji_C_1_IA_1

Protein Model on 7jji_C_1_IA_1 (TEMPLATE: 7jji )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) C 1 (C) polymer(polypeptide(L)) [1109 aa] Spike glycoprotein :SPIKE_SARS2
2 b IA 1 (i) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 616N 618T 644Q 645T (identity: 100.0 %/97.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7jji_C_1 identity=97.7%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :****************************************************************************************************:
7jji_C_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :             EEEE TT  EE  SS    SEEEEEEEEE  TT EEEEEEEE   STT   EE   EEE TT EEEEEEESSS EEEEEEESSSSTT:    
ExpBur          :eebebeeeeeeeeeebebbbbbbbbbeeeeeeeeeeebeebbbbbebebebbbbeeeeeeebebbbbbeebebeebbbbbbbbbbebbbbbbbbbebeee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7jji_C_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEE  TT  EEEEEEEEEEEEEEEEEEE SSSS EEEEEEEEEEEEEEEEEEEE            SS  EEEEEEEEEETTEEEEEEEEEE    :    
ExpBur          :eebbbbbeebeeebbbbbebebbebbbbbbebeeeeeeeeeebebbeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbeeeeebebbbeeeebeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :****************************************************************************************************:
7jji_C_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS      EEEEEEEE       EEEEEEEEEEETT  S TTTS B  SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHTT S   SEEE:    
ExpBur          :eebbeeebbbeeeeebebebebeebbbbbbbbbbeebeeeebebbebbebbbbbbebeebebbbebeeebebeebbbbeeebbbbbbbeeeebebeebee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7jji_C_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EE         EEEE     SB  HHHHSS S   BGGG EEEEE SEE  GGGGTTT   SEEEESSS GGGGGG EEEEEEEEEEEEEGGGGGGSSTT:    
ExpBur          :ebeebeeeeeeebbbbeeeeeebebeebbeeeebebbbebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbebebbebbeee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7jji_C_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SHHHHHT    TT  SEEEEE  TTTS  TT  TT EEE   SS   TT        EE TT   SS  BTTEE SEEE    TTS GGGSEEEEEEE:    
ExpBur          :eeeebbbebbebbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeeeeeeebeebeeeebeeeeeeebeebbeebebeeeeeebebbbbbbbe:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7jji_C_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEE SSS  SEE S        SSEEEEEETTEEEEEEEEE      TT  B   TTS   EEE SSS  EEEEE S    EEEEE  TTT    EEEET:    
ExpBur          :bbeeeeeebebbbeeeeeeeeeeebbebbbbbbeeebbbeebeeebeeeebbbeeeeeebebbbbbeeeebbebeebeeebbbbbbbbbeebeeebbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*****             **********************************************           *************************:
7jji_C_1     614:DVNCTXXXXXXXXXXXXXTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T    -------------  SSS   S EEEETTEEEES EEEEEEE   SEEETTEEEEEEE ----------- EEEEEEEE  S        TTEEE:    
ExpBur          :ebebe-------------eeebeeeeeeebebeebbbbebeeeeeeeeeebebeeebbbbeeee-----------eebbbbbeeeeeeeeeeeeeeeeee:    
Contact         :  b b                         bb                                                                    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7jji_C_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :EEEEEEEEEEEEEEE    EEEE TTHHHHTT HHHHHHHTTT HHHHHHHHHHHHHHHHHHHHHHHHH   SS     S    TT   TTTSB TTSSS:    
ExpBur          :bbeebebebeeebbbbbbebbebebeebbbeebeebeeebeeeeeebeebeeebeebbeebbebbeebbbebeeeeeebeeeebeebebeebbbeeeeeb:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :****************************************************************************************************:
7jji_C_1     814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :  BHHHHHHHHHS  S SSS   GGGGSSGGGGT HHHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHTGGGGSSSS     HHHHHHHHHHHHT  T:    
ExpBur          :eebebbbbbbeebeeeeeeeeeeeeebeeeebeeeeebbbeeebbeeeeeebeeeebbeebbbbbbbbbebbeebbeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7jji_C_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHTHHHHHHHHHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbebbeebbeebeeebeeeeeebeebbebbeebeebbbebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7jji_C_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHHTSS    TTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SS EEEE TTS   E:    
ExpBur          :bbeebeeebeebbebbeebbbbbbeeeeebbeeebbbbbbbbbbebbbbbbbbbeebeeeebeebebbbeeeebbeeeebbbbbeeeebbbbbebbeeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
7jji_C_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
SecStr          :E BTTSEEEES TTTSTT EE   B SSHHHH :    
ExpBur          :ebbeeebeeeeebeebeebeeeebeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123