[pdbjlvh2]Protein Model on 7jji_B_1_BB

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7jji_B_1_BB_1

Protein Model on 7jji_B_1_BB_1 (TEMPLATE: 7jji )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	B 1 (B)	polymer(polypeptide(L)) [1109 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		BB 1 (B)	non-polymer(VCG)	2-hydroxyethyl 2-deoxy-3,5-bis-O-(2-hydroxyethyl)-6-O-(2-{[(9E)-octadec-9-enoyl]oxy}ethyl)-alpha-L-xylo-hexofuranoside	101I 102R 103G 104W 119I 121N 126V 128I 168F 170Y 172S 190R 207H 227V 229L (identity: 100.0 %/97.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7jji_B_1 identity=97.7%

queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :****************************************************************************************************:
7jji_B_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :             EEEE TT  EE  SS    SEEEEEEEEE  TT EEEEEEEE   STT   EE   EEE TT EEEEEEESSS EEEEEEESSSSTT:    
ExpBur          :eebebeeeeeeeeeebebbbbbbbbbeeeeeeeeeeebeebbbbbebebebbbbeeeeeeeeebbbbbeebebeebbbbbbbbbbebbbbbbbbbebeee:    
Contact         :                                                                                       bbbb         

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7jji_B_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEE  TT  EEEEEEEEEEEEEEEEEEE SSSS EEEEEEEEEEEEEEEEEEEE            SS  EEEEEEEEEETTEEEEEEEEEE    :    
ExpBur          :eebbbbbeebeeebbbbbebebbebbbbbbebeeeeeeeeeebebbeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbeeeeebebbbeeeebeee:    
Contact         :     b b    b b                                       b b b                 b                b      

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :****************************************************************************************************:
7jji_B_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS      EEEEEEEE       EEEEEEEEEEETT  S TTTS B  SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHTT S   SEEE:    
ExpBur          :eebbeeebbbeeeeebebebebeebbbbbbbbbbeebeeeebebbebbebbbbbbebeebebbbebeeebebeebbbbeeebbbbbbbeeeebebeebee:    
Contact         :             b b                                                                                    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7jji_B_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EE         EEEE     SB  HHHHSS S   BGGG EEEEE SEE  GGGGTTT   SEEEESSS GGGGGG EEEEEEEEEEEEEGGGGGGSSTT:    
ExpBur          :ebeebeeeeeeebbbbeeeeeebebeebbeeeebebbbebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbebebbebbeee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7jji_B_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SHHHHHT    TT  SEEEEE  TTTS  TT  TT EEE   SS   TT        EE TT   SS  BTTEE SEEE    TTS GGGSEEEEEEE:    
ExpBur          :eeeebbeebbebbeebebbbbbbebbeebbeeebbeebebbeeeeeebeeeeeeeeeebeebeeeebeeeeeeebeebbeebebeeeeeebebbbbbbbe:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7jji_B_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEE SSS  SEE S        SSEEEEEETTEEEEEEEEE      TT  B   TTS   EEE SSS  EEEEE S    EEEEE  TTT    EEEET:    
ExpBur          :bbeeeeeebebbbeeeeeeeeeeebbebbbbbbeeebbbeebeeebeeeebbbeeeeeebebbbbbeeeebbebeebeeebbbbbbbbbeebeeebbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*****             **********************************************           *************************:
7jji_B_1     614:DVNCTXXXXXXXXXXXXXTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T    -------------  SSS   S EEEETTEEEES EEEEEEE   SEEETTEEEEEEE ----------- EEEEEEEE  S        TTEEE:    
ExpBur          :ebebe-------------eeebeeeeeeebebeebbbbebeeeeeeeeeebebeeebbbbeeee-----------eebbbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7jji_B_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :EEEEEEEEEEEEEEE    EEEE TTHHHHTT HHHHHHHTTT HHHHHHHHHHHHHHHHHHHHHHHHH   SS     S    TT   TTTSB TTSSS:    
ExpBur          :bbeebebebeeebbbbbbebbebebeebbbeebeebeeebeeeeeebeebeeebeebbeebbebbeebbbebeeeeeebeeeebeebebebbbeeeeeeb:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :****************************************************************************************************:
7jji_B_1     814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :  BHHHHHHHHHS  S SSS   GGGGSSGGGGT HHHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHTGGGGSSSS     HHHHHHHHHHHHT  T:    
ExpBur          :eebebbbbbbeebeeeeeeeeeeeeebeeeebeeeeebbbeeebbeeeeeebeeeebbeebbbbbbbbbebbeebbeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7jji_B_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHTHHHHHHHHHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbebbeebbeebeeebeeeeeebeebbebbeebeebbbebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7jji_B_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHHTSS    TTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SS EEEE TTS   E:    
ExpBur          :ebeebeeebeebbebbeebbbbbbeeeeebeeeebbbbbbbbbbebbbbbbbbbeebeeeebebbebbbeeeebbeeeebbbbbeeeebbbbbebbeeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
7jji_B_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
SecStr          :E BTTSEEEES TTTSTT EE   B SSHHHH :    
ExpBur          :ebbeeebeeeeebeebeebeeeebeeeeeeeee:

Protein Model on 7jji_B_1_BB_1 (TEMPLATE: 7jji )

Input Residue Numbers for Focused Sites