#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1062 aa] | Spike glycoprotein :SPIKE_SARS2 |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7dk3_A_1 identity=93.5% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :******************************************************** *************************************: 7dk3_A_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : SS EEE SSTT B SS S EEEEEEEE TT EEEEEEE ------- B EE SSEEEEEEEESS EEEEEEESSSSTT: ExpBur :eeeebeeeeebeeeebebebbbbbbbeeeeeeeeeeeeeebbbbbebebbebbbee-------eebbbeebebeebbbbbbbbbbbbbbbbbbbeebebe: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7dk3_A_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEE SSSEEEEEEEE SS EEEE SSS EEEE S S EEEEEEEEE SS SEEEEEEEEEETTEEEEEEEE S: ExpBur :eebbbbbbebebebbebbebeebebbbbbbeebeeeeeeeeeeeebeeeeeeeeeeeebeeeebebeeeeeeeebbebbbbbbeeeebebbbeeeeeebe: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :********************************** ***********************************************************: 7dk3_A_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS S BEEEEEE EEEEEEEEEE ------- S B SEEEEEEE EEEEEEEEE TTSSEEEEEESSSSHHHHHHHHTTSS SEEE: ExpBur :eebbeeebbbeeeeebebebebeebbbbbebbee-------eeebbbbebbbbbbebeeeebbbebeeebebeebbbbeeeebbebebeeeeeebeebee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7dk3_A_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EEEE S EEEE B STTTTS SS BSSS EEEEE SSB THHHHHS SEEEESSS TTHHHHS SEEEEEEEEE GGGGGG STT: ExpBur :ebeebeeeeeeebbbbeeeeeebebeebbeeeebbbbbebeeeebeebbbebeebeeeeebeeeebeebeeeebeeebbbebebbbbbbbbebbeebbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7dk3_A_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHTT TT EEEEEEE TTTT TT TT EEE SS TT EE SSS TTS BTTEE SEEE TTS TTTS EEEEEE: ExpBur :eeeebbbebbebeeebebbbbbbebbeebbeeebbeebebbeebeeebeebeeeeeeebeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7dk3_A_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SSS S SSEEEEEETTEEEEEEEEE TT EE TTSSEEEEE SSS EEEEE S SEEEEEE TTT EEEEE: ExpBur :bbeeeeeebebbbeeeeeeebeeebbebbbbbbeeebebeebeeebeeeeeeeeeeeeeeebbbbeeeeebbebeebeeebbbbbbbbeeebeebbbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* ************************************ *************************: 7dk3_A_1 614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :TS S -------------------- EEE SSEEEESSEE SS B SEEEETTEEEEEE ------------ EEEEEEB TTEEE: ExpBur :eeeeeee--------------------eeeebebbbbebbeebeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7dk3_A_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EES EEEEEEEEEEE EEEE HHHHHSSS HHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHH SS SS TT TTTSB TTSSS: ExpBur :bbeebebebeebbbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbbebbeebbeebeeebeeeeeeebbebebeebbeeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************** ************************************************************: 7dk3_A_1 814:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr : BHHHHHHHHH -------------------------- SSEEEE SS HHHHHHHHHHHHHHHHHTTTHHHHSS HHHHHHHHHHTTT T: ExpBur :ebbebbebbeeebe--------------------------eeebbeeeeeebeeeebbeebebbbbbbbebbebbeeeeeeebebeebbbebbeebebbe: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7dk3_A_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHHHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbebbeebbbebeeebeeeeeebbebeebeeebeebeeebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7dk3_A_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHTTTS STTTSSSSEEEEEEEEEETTEEEEEEEEEEE EEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS E: ExpBur :ebeebeebbeebbebbeebbbeebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbeeeebbbbbeeeebbbbbebbbeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 :**********************************: 7dk3_A_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 SecStr :E BTTTEEE S TTTSTT EE B THHHHHH : ExpBur :ebbeeebeeeeebeebeebeebebeeeeeeeeee: |