#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7df3_A_1_H_1

Protein Model on 7df3_A_1_H_1 (TEMPLATE: 7df3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [1088 aa] Spike glycoprotein :SPIKE_SARS2
2 b H 1 (H) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 108T 234N 236T 237R (identity: 100.0 %/95.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7df3_A_1 identity=95.8%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :********************************************************       *************************************:
7df3_A_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :     SS       EEE SSTT B SSS    S EEEEEEEE  TT EEE EEE  -------  B    EE TTEEEEEEEESS    EEEEESSSSTT:    
ExpBur          :eeeebeeeeeeeeeebebebbbbbbbeeeebebeeeebeebbbbbeeebbebbbee-------eebebeebebeebbbbbbbbbbbbbbbbbbbbebeee:    
Contact         :                                                                                              b     

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7df3_A_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEEE SSSEEEEEEEEEE SS  EEE   SSS    EEEE SEEEEEEEEEEEE            SSB EEEEEEEEEETTEEEEEEEEE   BS:    
ExpBur          :eebbbbbbebebebbbbbebebbebbbbbbeebeeeeeeeeeeebbbeeeeeeeeeeebeeeeeebeeeeeebebbbbbbbbbeeeebebbeeeeebebe:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**********************************       ***********************************************************:
7df3_A_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS   S   BEEEEEE      SEEEE  EEE  -------    EE SEEEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHTSS   SEEE:    
ExpBur          :eebbeeebbbeeeeebebebebeebbbbbbbbee-------eeebebeebbbbbbebeeeebbbebeeebebeebbbbeeebbbbbbbeeeebebeebee:    
Contact         :                    b bb                                                                            

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7df3_A_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :E        SSEEEE      B  HHHHTS SS  BSSS EEEEE SSB  TTGGGTS   SEEEESSS GGGTTT  BSSEEEEEEEEEGGGSTTSSTT:    
ExpBur          :ebeeeeeeeeeebbbbbeeeeebebeebbeeeebbbbbbbeeeebeebbebeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbebebbebbbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7df3_A_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SIIIIII    TT  EEEEEEE HHHH  TT   SSEEE   SS   TT        EE SSS  TTS BTTEE SEEE    TTS TTTSEEEEEEE:    
ExpBur          :eebebbeebbbbbeebebbbbbbebbeebbeeeebeebebbeeeeeebeeeeebeeeebeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbb:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7df3_A_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EE  SSS  SB  S        SSEEEEEETTEEEEEEEEE S    TT   EE TTSSEEEEE SSS  EEEEE SS S EEEEE  TTT    EEEEE:    
ExpBur          :bbebeebebebbbeeeeeebbeeebbebbbbbbeeebebbeeeeebeeeebbeeeeeeebebbbbbeeeebbbbeebeebbbbbbbbbbeebeebbbbbb:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    ************************************            *************************:
7df3_A_1     614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T  SS  -------------------- EEE SSEEEES EE SS    SEEEETTEEEEEE ------------  EEEEEE            TTEEE:    
ExpBur          :eeeeeee--------------------eeeebeebbbbbbeeeeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7df3_A_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :EEEEEEEEEEEEEEE    EEEE HHHHHS S HHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  SSS   TTTSEETTSSS:    
ExpBur          :bbbebebebeeebbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbbebbeebbbeeeeebeeeeeeebeebebeebbeeeeeeb:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :****************************************************************************************************:
7df3_A_1     814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          : EEHHHHHHHHSS  SSSSS   HHHHHHS  TT HHHHHHHTTEEEE  SS HHHHHHHHHHHHHHHHHHTTTTTSSS     HHHHHHHHHHHHT  T:    
ExpBur          :ebbebbbbbbeebeeeeeeeeeeeeebeeeeeeeeebbebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7df3_A_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHHHH S TTHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeebeebbebbeebbeebeeebeeeeeebeebbebbeebeebbbebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7df3_A_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHTTTTS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS   E:    
ExpBur          :bbeebeebbeebbebbeebbbeebeeeebbeeeebbbbbbbbbbbbbbbbbbbbbeeeeeebebbebbbeeeebbebeebbbbbeeeebebbbebbebee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7df3_A_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          :E BTTTEEE S TTTSTT EE   B TTGGGGT :    
ExpBur          :ebbeeebeeeeebeeeeebeebebeeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123