#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1088 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | H 1 (H) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 108T 234N 236T 237R (identity: 100.0 %/95.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7df3_A_1 identity=95.8% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :******************************************************** *************************************: 7df3_A_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : SS EEE SSTT B SSS S EEEEEEEE TT EEE EEE ------- B EE TTEEEEEEEESS EEEEESSSSTT: ExpBur :eeeebeeeeeeeeeebebebbbbbbbeeeebebeeeebeebbbbbeeebbebbbee-------eebebeebebeebbbbbbbbbbbbbbbbbbbbebeee: Contact : b queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7df3_A_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEE SSSEEEEEEEEEE SS EEE SSS EEEE SEEEEEEEEEEEE SSB EEEEEEEEEETTEEEEEEEEE BS: ExpBur :eebbbbbbebebebbbbbebebbebbbbbbeebeeeeeeeeeeebbbeeeeeeeeeeebeeeeeebeeeeeebebbbbbbbbbeeeebebbeeeeebebe: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :********************************** ***********************************************************: 7df3_A_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS S BEEEEEE SEEEE EEE ------- EE SEEEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHTSS SEEE: ExpBur :eebbeeebbbeeeeebebebebeebbbbbbbbee-------eeebebeebbbbbbebeeeebbbebeeebebeebbbbeeebbbbbbbeeeebebeebee: Contact : b bb queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7df3_A_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :E SSEEEE B HHHHTS SS BSSS EEEEE SSB TTGGGTS SEEEESSS GGGTTT BSSEEEEEEEEEGGGSTTSSTT: ExpBur :ebeeeeeeeeeebbbbbeeeeebebeebbeeeebbbbbbbeeeebeebbebeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbebebbebbbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7df3_A_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SIIIIII TT EEEEEEE HHHH TT SSEEE SS TT EE SSS TTS BTTEE SEEE TTS TTTSEEEEEEE: ExpBur :eebebbeebbbbbeebebbbbbbebbeebbeeeebeebebbeeeeeebeeeeebeeeebeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7df3_A_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EE SSS SB S SSEEEEEETTEEEEEEEEE S TT EE TTSSEEEEE SSS EEEEE SS S EEEEE TTT EEEEE: ExpBur :bbebeebebebbbeeeeeebbeeebbebbbbbbeeebebbeeeeebeeeebbeeeeeeebebbbbbeeeebbbbeebeebbbbbbbbbbeebeebbbbbb: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* ************************************ *************************: 7df3_A_1 614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T SS -------------------- EEE SSEEEES EE SS SEEEETTEEEEEE ------------ EEEEEE TTEEE: ExpBur :eeeeeee--------------------eeeebeebbbbbbeeeeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7df3_A_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EEEEEEEEEEEEEEE EEEE HHHHHS S HHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH SS SS SSS TTTSEETTSSS: ExpBur :bbbebebebeeebbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbbebbeebbbeeeeebeeeeeeebeebebeebbeeeeeeb: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :****************************************************************************************************: 7df3_A_1 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr : EEHHHHHHHHSS SSSSS HHHHHHS TT HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHHTTTTTSSS HHHHHHHHHHHHT T: ExpBur :ebbebbbbbbeebeeeeeeeeeeeeebeeeeeeeeebbebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7df3_A_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHHHHHHHHHHHHHHHHHHHHHHH S TTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeebeebbebbeebbeebeeebeeeeeebeebbebbeebeebbbebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7df3_A_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHTTTTS STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS E: ExpBur :bbeebeebbeebbebbeebbbeebeeeebbeeeebbbbbbbbbbbbbbbbbbbbbeeeeeebebbebbbeeeebbebeebbbbbeeeebebbbebbebee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 :**********************************: 7df3_A_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 SecStr :E BTTTEEE S TTTSTT EE B TTGGGGT : ExpBur :ebbeeebeeeeebeeeeebeebebeeeeeeeeee: |