[pdbjlvh2]Protein Model on 7dcx_I_1_F

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7dcx_I_1_F_1

Protein Model on 7dcx_I_1_F_1 (TEMPLATE: 7dcx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	I 1 (C)	polymer(polypeptide(L)) [1061 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		F 1 (G)	polymer(polypeptide(L)) [180 aa]	The light chain of 3C1 fab	454R 456F 457R 458K 460N 461L 462K 465E 468I 473Y 474Q 475A 476G 477S 489Y 490F 491P (identity: 100.0 %/93.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7dcx_I_1 identity=93.4%

queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :********************************************************       *************************************:
7dcx_I_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :     SS       EEE SS  EE SSS   SS EEEEEEEE  SS EEEEEEB  -------  B    EE TT EEEEEEESSS    EEEESSSSSS:    
ExpBur          :eeeebeeeeeeeeeebebebbbbbbeeeeebeeeeeeeeeebbbbeeebbbbbbee-------ebbbbeebebeebbbbbbbbbbebbbbbbbbeebeee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7dcx_I_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEEE SS EEEEEE   EEEEEEEEEE  SSS S EEEEEEEES   S  EEEE            SS  EEEEEEEEEETTEEEEEEEEEE   S:    
ExpBur          :eebbbbbeebeeeebebbebebbebbbbbbeeeeeeeebebebeebeeeeeeeeeeeebeeeeeebeeeeeebeebebbbbbeeebebebbbeeeebebe:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**********************************       ***********************************************************:
7dcx_I_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS  S   EEEEEEEEE      EEEE EE B  -------  S B  S EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSSS  SEEE:    
ExpBur          :eebeeeebbbeeeeebebebebeebbbbbbbbee-------eeebebbebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeeeebeebee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7dcx_I_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EEEEE    S          SB  TTTTTS S  B SSS EEEEE SSB   HHHHSSS  SEEEE SS GGGGTTS  S EEEEEEEE TTSGGGSSTT:    
ExpBur          :ebeebebeeeeebebeeeeeeebebeebbebeebbbbbbbeeeebeebbbebeebeeeeebebebeeeeeeeebeeeebbebebbbbbbbeebbebbbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7dcx_I_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  STTTTTT    TT   EEEE B TTTS  TT   S EE    SS   SS      S    SSS  TTS BTTB   SEE    TTS SSS  EEEEEE:    
ExpBur          :eeeebbbebbebeeebebbbbbbbbeeebbeeebbeeebbbbeeeeeeeeeeeeeeeeeeeeeeeebeeeeeeebeeebeebbbeeeeeeeebbbbbbbb:    
Contact         :                                        b bbb bbb  b  b    bbbbb           bbb                      

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7dcx_I_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :     SS   SS S        SSEEEEE SS EEEEEEEE      TT  EEE TTS EEEEEETTTTEEEEEEE S EEEEEEE  TTT     EEES:    
ExpBur          :bbeeeeeeeebbbeeeeeebbeeebbebebeebeeebbbeebeeebeeeeeebeeeeeeebbbebeeeeeebebeebbebbbbbbbbbeeebeeebbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    ************************************            *************************:
7dcx_I_1     614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :S  SS  -------------------- EEE SSSEEESSEE SS B  SEE SSSEEEEEE ------------  EEEEEEB  S        TT EE:    
ExpBur          :ebeeeee--------------------eeeebeebbbeebeebeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :************************************************************************************************** *:
7dcx_I_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKXS: 813
SecStr          :EE  EEEEEEEEEEE    EEEE HHHHHSTT STHHHHHGGG THHHHHHHHHHHHHHHHHHHHHHHH   SS     S   STT   TTTS BTT - :    
ExpBur          :bebebebebeebbbbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeeeebeebebeebebeeee-e:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :**************                          ************************************************************:
7dcx_I_1     814:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          : B TTTHHHHSS  --------------------------  SSEEEE  SS HHHHHHHHHHHHHHHHHSTTHHHHSS     HHHHHHHHHHTTT  T:    
ExpBur          :bbbebbebbbeeee--------------------------eeebbeeeeeebeeeebbeebbbbbbbbbebbbebeeeeeeeeebeebbbebbebbebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7dcx_I_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :THHHHTHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHHHHHHHHHHHHTTGGG  TTSS S SHHHHTTS TTTHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbbeeeeeebbeebeebbeebeeebeeeeeebeebbebeeebeebeeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7dcx_I_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHTTSS    TTSSSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEEES EESSSEEEEESSSEEEE SS EEEE SSS   B:    
ExpBur          :ebeebeeebeebbebbeebbbbebeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbebeeeebbbeeeeeebbbebbbbee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7dcx_I_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          :   GGGEEEEEESSS TT        THHHHHH :    
ExpBur          :ebbeebbeeeeebeeeeeeeebebeeeeeeeeee:

Protein Model on 7dcx_I_1_F_1 (TEMPLATE: 7dcx )

Input Residue Numbers for Focused Sites