#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7dcx_C_1_G_1

Protein Model on 7dcx_C_1_G_1 (TEMPLATE: 7dcx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) C 1 (D) polymer(polypeptide(L)) [1059 aa] Spike glycoprotein :SPIKE_SARS2
2 b G 1 (H) polymer(polypeptide(L)) [213 aa] The light chain of 3C1 fab 486F (identity: 100.0 %/93.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7dcx_C_1 identity=93.2%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :********************************************************       *************************************:
7dcx_C_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :     SS      EEEE SS  EE SS     S EEEEEEEE  TT EEEEEEBB -------  B    EESTT EEEEEEESSS EEEEEEESSSSSS:    
ExpBur          :eeeebeeeeebeeeebebebbbbbbeeeeeeeeebeebeeebbbbebebbebbbee-------eebbbeebebeebbbbbbbbbbebbbbbbbbbebeee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7dcx_C_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEEE SS EEEEEE   EEEEEEEEBS SSS  TT   EEEEES   S  EEEE            SSEEEEEEEEEEEETTEEEEEEEEEEEEES:    
ExpBur          :eebbbbbbebeeebbebbebebbebbbbbbeeeeeebeeebeeeebeeeeeeeeeeeeeeeeebebeeeeeebeebbbbbbbeeebebebbeeeeeeebe:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**********************************       ***********************************************************:
7dcx_C_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SSS S   EEEEEEEEE      EEEEEE  B  -------      BSEEEEEE  EEEEEEEEE TTS EEEEEETTT HHHHHHHHHT SS  SEEE:    
ExpBur          :eebeeeebbbeeebebeeebebeebbbbbbbbee-------eeebebeebbbbbbebeeeebbbebeeebebeebbbbeeeeebebbbeeeeeebeebee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7dcx_C_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :EEEEEE     EE       EE   TTSTTSS  B SSS    EE SEE   SS   SS SS  EE SS TT SSSS BS EEEE BEE STTSS   TT:    
ExpBur          :ebeebeeeeeeebebbeeeeeebebeebeeeeebebbbebeeeebeebbbeeeeeeeeeeeebeeeeeeeeeebeebbbbebebbbbbbbbebbebbbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7dcx_C_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :   TTTTTT B  TTB SEEEEEE TTTS  TT B   EEE   SS   TTB     S    SSS   SSS SS    EEE  B TTS GGGS EEEEEE:    
ExpBur          :eeeebbbebbbbbeebbbbbbbbebbeebeeeebbeebbbbeebeeebeeeeeeeeeeeeebeeeebeeeeeeebeebeeebebeeeeeeeebbbbbbbb:    
Contact         :                                                                        b                           

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7dcx_C_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEB  SS   BB S        SSEEEEEETTEE  EEEE  S    SS  EEE TTSSEEEEE SSSS EEEEE   EEEEEEEE  TTT    EEEES:    
ExpBur          :bbbeeeeebebbbeeeeeeeeeeebbebbbbebeeebbbeeeeeeeeeeeeeeeeeeeeeebbbbbeeeeebbbeebeebbbbbbbbbeeebeeebebbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    ************************************             ************************:
7dcx_C_1     614:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :S  SS  -------------------- EEE SSSEEES EE SS B  SEEEETTEEEEEE ------------- EEEEEEB           SSEEE:    
ExpBur          :ebeeeee--------------------eeeebeebbbeebeeeeeeeeeebebeeebbbbeee-------------eebbbbeeeeeeeeeeeeeeeebe:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :************************************************************************************************** *:
7dcx_C_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKXS: 813
SecStr          :EEEEEE  EEEEEEE     EEE HHHHH SS HHHHHHHGGG THHHHHHHHHHHHHHHHHHHHHHHT   SS     S   STT  TTTTS  TT - :    
ExpBur          :bbeebebebeeebbbbbbebbebebeebbbeebebbeebbeeeeeebeebeeebeebbeebbebbeebbeebeeebeeeeeeebeebebeebebeeee-e:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :**************                           ***********************************************************:
7dcx_C_1     814:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :   HHHHHHHHS  ---------------------------  SEEE   SS HHHHHHHHHHHHHHHHHSTTGGGTSS     HHHHHHHHHHTTT  T:    
ExpBur          :ebbebbebbbeebe---------------------------eeebeeeeeebeeeebbeebbbbbbbbbebbbebeeeeeeeeebeebbbebbeebbbbe:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7dcx_C_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :THHHHTHHHHHHHHHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbeeebeeebbeebeebbeebbeebeeeeeebeebeebeebbeebbeebeeebeeeeebebeebeebeeeeeeeebeeebeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7dcx_C_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHTSSSS    TTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSEEEEESSSEEEE SS EEEE SSS   B:    
ExpBur          :ebeebeeebeebbebbeebbebbbeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeeeebbbeeeeebbbbebbebee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7dcx_C_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          :   TTTEEEEEESSS TT        TTTTTT  :    
ExpBur          :ebbeeebeeeeebeeeeeeeebebeeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123