Protein Model on 7cws_M_1_O_1
(TEMPLATE: 
7cws
)Protein Model on 7cws_M_1_O_1
(TEMPLATE: 7cws
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | M 1 (O) | polymer(polypeptide(L)) [1076 aa] | Spike glycoprotein :SPIKE_SARS2 | |
| 2 | b | O 1 (R) | polymer(polypeptide(L)) [1076 aa] | Spike glycoprotein :SPIKE_SARS2 | 317N 319R 357R 558K 559F 560L 562F 563Q 564Q 565F 566G 567R 568D 569I 570A 571D 572T 589P 592F 613Q 614D 647A 665P 666I 668A 669G 696T 697M 699L 700G 701A 702E 703N 704S 705V 706A 707Y 709N 711S 712I 713A 715P 957Q 961T 965Q 968S 969N 970F 971G 995R 1002Q 1006T 1009T 1010Q 1013I 1039R 1040V 1041D 1045K 1046G 1047Y 1068V 1072E 1074N 1077T 1078A 1079P 1089F 1090P 1094V 1107R 1121F 1123S 1124G 1128V 1129V 1130I 1141L (identity: 100.0 %/94.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7cws_M_1 identity=94.9% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
:****************************************************************************************************:
7cws_M_1 1:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 100
SecStr : EEEESS EE S S EEEEEEEE SSEEEE EEEEEE SSS EEE EE S EEEEE SS EEEE BSSSSSS:
ExpBur :eeeebeeebeeeeeebebebbbbbbbeeeeeeeeeeeeeebbbbbeeebbbbbbbeeeeeeeeeebebeebebeebbbbbbebeeebbbbbbbbeebbee:
queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
:****************************************************************************************************:
7cws_M_1 101:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 200
SecStr :S EEEEE TTSSEEEEEEEEEE SS EEEEE SSTT EEEESTTTEEEEEEEEEEEEES SS SSSS TTEEEEEEEEETTEEEEEEEEE SS:
ExpBur :eebbbbbbeeeebebebbebebbebbbbbbeeeeeeeeeebbeeebbeeeeeeeeeeeeeebbeeeeeeebeeebbbbbbbbbeeeebbbbbeeeebeee:
queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
:************************************** **********************************************************:
7cws_M_1 201:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPXXXXSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 300
SecStr :SS S EEEEEEEEE EE EEEEE S ---- S EEEEEEE EEEEEEEEE TTS EEEEEETTS TTHHHHHHHTSSS SEEE:
ExpBur :eebeeeebbbeeebebebebebeebbbbbbbeeeeeee----eeeebeebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbebeebebeeeee:
queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
:****************************************************************************************************:
7cws_M_1 301:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 400
SecStr :EEEE S EEEE S HHHHS SS BTTS EE SEE SSSSSSS S EE SS TTSTTTS SSEEE EEEEGGGGTTSSTT:
ExpBur :ebeeeebeeeeebebeeeeeeebebeebbeeeebebbeebeeeebeebbbbeeebeeeeebeeeebeeeeeeebeebebbebbbbbbbbebebeebbbee:
Contact : b b b
queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
:******************************* *******************************************************************:
7cws_M_1 401:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 500
SecStr : SHHHHTTS SS SEEEEEE TTTT -- EEE SS TT S EE SSS TTS TTEE SEEE TT TTT EEEEE E:
ExpBur :eebbbbbebbbbbeebebbbbbbebbeebbe--ebeebbbbeebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeebeeeebbbbbbbb:
queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
:****************************************************************************************************:
7cws_M_1 501:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 600
SecStr :E SSS SEE SSEEEEEETTEEEEEE EE TT B TTS B EE SSS EEE S EEEEEE TTT S EEEEE:
ExpBur :bbeeeeeeebbebeeeeeebbeeebbebebeebeeebebeeeeeebeeeeeebeeeeeeeebbbbbbeeebbebeebbeebbbbbbbbbeebeebbbbbe:
Contact : bbb bbbbbbbbbbb b b b
queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
:******* ************************************ *************************:
7cws_M_1 601:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 700
SecStr :S SS -------------------- EEE SSEEEES EE SS B EEEETTEEEE ------------ EEEE B S TTEEE:
ExpBur :ebeeeee--------------------eeeebeebbbeebeebeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeee:
Contact :b b bb bb bb bbbbbbbbb b bbb
queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
:****************************************************************************************************:
7cws_M_1 701:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 800
SecStr :EES EEEEEEEEEEE EE HHHHHS S HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH SS SS SSS TTTS SSSSS:
ExpBur :bbbebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeebebeeeeebeebebeebbeeeeeeb:
Contact : b
queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
:************** ******************************************************************:
7cws_M_1 801:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 900
SecStr : HHHHHHHHH -------------------- HHHHHHHHTEE SS HHHHHHHHHHHHHHHHHHTTTTSSSS HHHHHHHHHHHHT T:
ExpBur :eebebbbbbbeebe--------------------eeeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebee:
queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
:****************************************************************************************************:
7cws_M_1 901:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1000
SecStr :HHHHHHHHHHHHHHHHHHHHHHHHHHH SSTTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :ebbeeeeeebbeebeebbeebbeebeebeeebeebeebbeebeebbeebeeebeeeeebeebebeebbeebeeeebeebbeebbebbbebbeebbeebee:
Contact : b b b bbbb b b b bb b
queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
:****************************************************************************************************:
7cws_M_1 1001:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1100
SecStr :HHHHHHHHHHHHHHHHHHTTTS SSSSSSSSEEEEEEEEEETTEEEEEEEEEEE EEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS B:
ExpBur :bbeebeebbeebbebbeebbbeebeeeebbeeeebbbbbbbbbbebbbbbbbbbbeeeeeebebbebbbeeeebbebeebebbbeeeebbbbbebbebee:
Contact : bbb bbb b b b bbb bb b b
queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
:**********************************:
7cws_M_1 1101:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1134
SecStr : BTTTEEE S TTT SS EE B SHHHHHH :
ExpBur :ebbeeebeeeeeeeeeeebeeeebeeeeeeeeee:
Contact : b bb bbb b
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[assembly_id:1]
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