#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | M 1 (O) | polymer(polypeptide(L)) [1076 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | G 1 (H) | polymer(polypeptide(L)) [107 aa] | Light Chain of H014 Fab | 365Y 373S 374F 375S 376T 377F 503V 508Y (identity: 100.0 %/94.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cws_M_1 identity=94.9% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************************************************************************************************: 7cws_M_1 1:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 100 SecStr : EEEESS EE S S EEEEEEEE SSEEEE EEEEEE SSS EEE EE S EEEEE SS EEEE BSSSSSS: ExpBur :eeeebeeebeeeeeebebebbbbbbbeeeeeeeeeeeeeebbbbbeeebbbbbbbeeeeeeeeeebebeebebeebbbbbbebeeebbbbbbbbeebbee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7cws_M_1 101:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 200 SecStr :S EEEEE TTSSEEEEEEEEEE SS EEEEE SSTT EEEESTTTEEEEEEEEEEEEES SS SSSS TTEEEEEEEEETTEEEEEEEEE SS: ExpBur :eebbbbbbeeeebebebbebebbebbbbbbeeeeeeeeeebbeeebbeeeeeeeeeeeeeebbeeeeeeebeeebbbbbbbbbeeeebbbbbeeeebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :************************************** **********************************************************: 7cws_M_1 201:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPXXXXSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 300 SecStr :SS S EEEEEEEEE EE EEEEE S ---- S EEEEEEE EEEEEEEEE TTS EEEEEETTS TTHHHHHHHTSSS SEEE: ExpBur :eebeeeebbbeeebebebebebeebbbbbbbeeeeeee----eeeebeebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbebeebebeeeee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7cws_M_1 301:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 400 SecStr :EEEE S EEEE S HHHHS SS BTTS EE SEE SSSSSSS S EE SS TTSTTTS SSEEE EEEEGGGGTTSSTT: ExpBur :ebeeeebeeeeebebeeeeeeebebeebbeeeebebbeebeeeebeebbbbeeebeeeeebeeeebeeeeeeebeebebbebbbbbbbbebebeebbbee: Contact : b bbbbb queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :******************************* *******************************************************************: 7cws_M_1 401:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 500 SecStr : SHHHHTTS SS SEEEEEE TTTT -- EEE SS TT S EE SSS TTS TTEE SEEE TT TTT EEEEE E: ExpBur :eebbbbbebbbbbeebebbbbbbebbeebbe--ebeebbbbeebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeebeeeebbbbbbbb: Contact : b b queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7cws_M_1 501:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 600 SecStr :E SSS SEE SSEEEEEETTEEEEEE EE TT B TTS B EE SSS EEE S EEEEEE TTT S EEEEE: ExpBur :bbeeeeeeebbebeeeeeebbeeebbebebeebeeebebeeeeeebeeeeeebeeeeeeeebbbbbbeeebbebeebbeebbbbbbbbbeebeebbbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* ************************************ *************************: 7cws_M_1 601:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 700 SecStr :S SS -------------------- EEE SSEEEES EE SS B EEEETTEEEE ------------ EEEE B S TTEEE: ExpBur :ebeeeee--------------------eeeebeebbbeebeebeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7cws_M_1 701:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 800 SecStr :EES EEEEEEEEEEE EE HHHHHS S HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH SS SS SSS TTTS SSSSS: ExpBur :bbbebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeebebeeeeebeebebeebbeeeeeeb: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************** ******************************************************************: 7cws_M_1 801:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 900 SecStr : HHHHHHHHH -------------------- HHHHHHHHTEE SS HHHHHHHHHHHHHHHHHHTTTTSSSS HHHHHHHHHHHHT T: ExpBur :eebebbbbbbeebe--------------------eeeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :****************************************************************************************************: 7cws_M_1 901:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1000 SecStr :HHHHHHHHHHHHHHHHHHHHHHHHHHH SSTTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebbeebeebeeebeebeebbeebeebbeebeeebeeeeebeebebeebbeebeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7cws_M_1 1001:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1100 SecStr :HHHHHHHHHHHHHHHHHHTTTS SSSSSSSSEEEEEEEEEETTEEEEEEEEEEE EEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS B: ExpBur :bbeebeebbeebbebbeebbbeebeeeebbeeeebbbbbbbbbbebbbbbbbbbbeeeeeebebbebbbeeeebbebeebebbbeeeebbbbbebbebee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 :**********************************: 7cws_M_1 1101:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1134 SecStr : BTTTEEE S TTT SS EE B SHHHHHH : ExpBur :ebbeeebeeeeeeeeeeebeeeebeeeeeeeeee: |