#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cn9_C_1_F_1

Protein Model on 7cn9_C_1_F_1 (TEMPLATE: 7cn9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) C 1 (C) polymer(polypeptide(L)) [1037 aa] Spike glycoprotein :SPIKE_SARS2
2 b F 1 (k) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 165N (identity: 100.0 %/92.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cn9_C_1 identity=92.8%
queryA        27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
                :****************************************************************************************************:
7cn9_C_1      14:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 113
SecStr          : EEE SS     SSS   SS  EEEEEEE  TT EEE  S SS S  SSSS TT   B  TT EEEEE SS S    EEEESS SSSS   EEEE SSSE:    
ExpBur          :eeeebebbbbbbeeeeebeeeeeebeeebbbeeeebebbeeeeebeeeeeeeebeeebebeebbbbbbbebeeeebbbbbbeeeeeeebbbbeeeeeeeb:    

queryA       127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
                :*********************************     ************          ****************************************:
7cn9_C_1     114:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVXXXXXNCTFEYVSQPFLXXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 213
SecStr          :EEE S               SSS   SS     -----      B     ----------  EEEEEEEETTS EEEEEEEE  S  SSS  S    B  :    
ExpBur          :bbbbbeeeebebebeeeebeeeeeeeeebeeee-----eeeeeeeeeeee----------eebbbebbbeeeeebebbbeebeeeeeeebeeeebebeee:    
Contact         :                                      b                                                             

queryA       227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
                :****************************************************************************************************:
7cn9_C_1     214:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 313
SecStr          :      S   EEEE      SSSSSSS      S          EEEEEEE   TT      EETTS HHHHHHHHHT SS  SEEEEEEEE       E:    
ExpBur          :eeeeeeeebebbbbeebeeeeebeeeeeeeeeeeeeebbbbeebeeeebbbebeeebebeeeebeeebbebebbbeeeeeebeebeeebeebeeeeeeeb:    

queryA       327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
                :****************************************************************************************************:
7cn9_C_1     314:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 413
SecStr          :EE S       HHHHHT S    SSS EEEEE S     HHHHHSTTSTT EE SS TTGGGT EES EEEEEEEE SSTTTT BTTB  HHHHHTS   :    
ExpBur          :ebbeeeeeebebeeeeeeeebbbbbebeeeebeebbbebeeebeeeebeeeeeeeeeeeebbeebbbebebbbbbbeeebbeebbeebeeebbeebbbeb:    

queryA       427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
                :***********************************************             ****************************************:
7cn9_C_1     414:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYXXXXXXXXXXXXXNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 513
SecStr          :SSS  EEEEEE TT   SSTTS   EES  SS   SSS         -------------     SEE   S  SSSS   EEEEEEE  SSSS   EE :    
ExpBur          :eeebbbbbbeebeeeeeeeeeeeebeeebeeeebeeeeeeeeeebee-------------eeeebbbeeebbbeeeeeebbebbbbeebeeeeeeeebbb:    

queryA       527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
                :**********************************************************************************************      :
7cn9_C_1     514:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVXXXXXX: 613
SecStr          :         SS   EEETTB    EEEE  S   SS S   SSTT   EEE TTT  EEEEE    EEEEEEE  TTT    EEE TT   S  ------:    
ExpBur          :ebeeeeeeeeebbebbbbebeeebbbeeeeeeeeeeebeeeeeeeeeebbbbbeeeebbbbeebeebbbbbbbbbeeeeeebbbbbeeeeeeee------:    

queryA       627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
                :       ***************************************             *****************************************:
7cn9_C_1     614:XXXXXXXRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICAXXXXXXXXXXXXGSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 713
SecStr          :-------   SSSS   EETTEE TTSEE    B  SS  STTEE ------------  SS  S EEEEB  S        TT  B   EEEEEEEEEE:    
ExpBur          :-------eeeeeebeeeebebbbbbebeeeeeeeebebebeeeebb------------eeeeeeebebbeeeeeeeeeeeeeeeebebbeebebebeeeb:    

queryA       727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
                :****************************************************************************************************:
7cn9_C_1     714:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 813
SecStr          :E       B  HHHHHHTT HHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH  SSS     S    TT  GGGTS  S  SSSS HHHHHHHHH :    
ExpBur          :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbebbbeebeeeeebeeeeebeebebeebbbeeeeeebbbebbeebeeeb:    

queryA       827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
                :**                        **************************************************************************:
7cn9_C_1     814:TLXXXXXXXXXXXXXXXXXXXXXXXXQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 913
SecStr          :  ------------------------   SS B    SS HHHHHHHHHHHHHHHHHTTTHHHHSS     HHHHHHHHHHHHTS THHHHHHHHHHHHH:    
ExpBur          :ee------------------------eeeebeeeeeeebeeeeebebbbbbbbbbbebbeebeebeeeeeebeebbbebbeebebeeebbeeeeeebbee:    

queryA       927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
                :***********************************************************  ***************************************:
7cn9_C_1     914:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1013
SecStr          :HHHHHHHHHHHHHSS  TTHHHHHHHHHHHHHHHHHHHHTT  TTSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbbebbeeeeeeeeebeebbebbeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbeebbeebbeebeeebeebeebbeebb:    

queryA      1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
                :****************************************************************************************************:
7cn9_C_1    1014:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1113
SecStr          :HHHHHHHTS    TTTSSSSEEEEEEE  BTTBEEEEEEEEEEE   B B  S EEETTEEEE SSSEEEBSSSS EEE TTS    B BSSSSEEEEES:    
ExpBur          :ebbbebbbbbeeeeebbeebebbbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebebbbeeeebbbbeebbbeeeebeeebbeeeeeb:    

queryA      1127:DVVIGIVNNTVYDP:1140
                :**************:
7cn9_C_1    1114:DVVIGIVNNTVYDP:1127
SecStr          :SSSSS B    B  :    
ExpBur          :eeeeeeeebebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123