[pdbjlvh2]Protein Model on 7cn9_C_1_B

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cn9_C_1_B_1

Protein Model on 7cn9_C_1_B_1 (TEMPLATE: 7cn9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	C 1 (C)	polymer(polypeptide(L)) [1037 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		B 1 (B)	polymer(polypeptide(L)) [1010 aa]	Spike glycoprotein :SPIKE_SARS2	40D 41K 43F 45S 47V 200Y 230P 232G 233I 282N 413G 740M 745D 755Q 756Y 757G 759F 762Q 765R 768T 786K 787Q 788I 789Y 790K 796D 855F 861L 862P 864L 866T 869M 873Y 886W 889G 890A 892A 893A 894L 895Q 896I 897P 900M 904Y 912T 913Q 914N 917Y 918E 921K 967S 976V 978N 979D 981L 982S 983R 984L 985D 1019R 1031E 1039R 1042F (identity: 100.0 %/92.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7cn9_C_1 identity=92.8%

queryA        27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
                :****************************************************************************************************:
7cn9_C_1      14:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 113
SecStr          : EEE SS     SSS   SS  EEEEEEE  TT EEE  S SS S  SSSS TT   B  TT EEEEE SS S    EEEESS SSSS   EEEE SSSE:    
ExpBur          :eeeebebbbbbbeeeeebeeeeeebeeebbbeeeebebbeeeeebeeeeeeeebeeebebeebbbbbbbebeeeebbbbbbeeeeeeebbbbeeeeeeeb:    
Contact         :             bb b b b                                                                               

queryA       127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
                :*********************************     ************          ****************************************:
7cn9_C_1     114:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVXXXXXNCTFEYVSQPFLXXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 213
SecStr          :EEE S               SSS   SS     -----      B     ----------  EEEEEEEETTS EEEEEEEE  S  SSS  S    B  :    
ExpBur          :bbbbbeeeebebebeeeebeeeeeeeeebeeee-----eeeeeeeeeeee----------eebbbebbbeeeeebebbbeebeeeeeeebeeeebebeee:    
Contact         :                                                                         b                          

queryA       227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
                :****************************************************************************************************:
7cn9_C_1     214:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 313
SecStr          :      S   EEEE      SSSSSSS      S          EEEEEEE   TT      EETTS HHHHHHHHHT SS  SEEEEEEEE       E:    
ExpBur          :eeeeeeeebebbbbeebeeeeebeeeeeeeeeeeeeebbbbeebeeeebbbebeeebebeeeebeeebbebebbbeeeeeebeebeeebeebeeeeeeeb:    
Contact         :   b bb                                                b                                            

queryA       327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
                :****************************************************************************************************:
7cn9_C_1     314:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 413
SecStr          :EE S       HHHHHT S    SSS EEEEE S     HHHHHSTTSTT EE SS TTGGGT EES EEEEEEEE SSTTTT BTTB  HHHHHTS   :    
ExpBur          :ebbeeeeeebebeeeeeeeebbbbbebeeeebeebbbebeeebeeeebeeeeeeeeeeeebbeebbbebebbbbbbeeebbeebbeebeeebbeebbbeb:    
Contact         :                                                                                      b             

queryA       427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
                :***********************************************             ****************************************:
7cn9_C_1     414:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYXXXXXXXXXXXXXNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 513
SecStr          :SSS  EEEEEE TT   SSTTS   EES  SS   SSS         -------------     SEE   S  SSSS   EEEEEEE  SSSS   EE :    
ExpBur          :eeebbbbbbeebeeeeeeeeeeeebeeebeeeebeeeeeeeeeebee-------------eeeebbbeeebbbeeeeeebbebbbbeebeeeeeeeebbb:    

queryA       527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
                :**********************************************************************************************      :
7cn9_C_1     514:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVXXXXXX: 613
SecStr          :         SS   EEETTB    EEEE  S   SS S   SSTT   EEE TTT  EEEEE    EEEEEEE  TTT    EEE TT   S  ------:    
ExpBur          :ebeeeeeeeeebbebbbbebeeebbbeeeeeeeeeeebeeeeeeeeeebbbbbeeeebbbbeebeebbbbbbbbbeeeeeebbbbbeeeeeeee------:    

queryA       627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
                :       ***************************************             *****************************************:
7cn9_C_1     614:XXXXXXXRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICAXXXXXXXXXXXXGSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 713
SecStr          :-------   SSSS   EETTEE TTSEE    B  SS  STTEE ------------  SS  S EEEEB  S        TT  B   EEEEEEEEEE:    
ExpBur          :-------eeeeeebeeeebebbbbbebeeeeeeeebebebeeeebb------------eeeeeeebebbeeeeeeeeeeeeeeeebebbeebebebeeeb:    

queryA       727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
                :****************************************************************************************************:
7cn9_C_1     714:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 813
SecStr          :E       B  HHHHHHTT HHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH  SSS     S    TT  GGGTS  S  SSSS HHHHHHHHH :    
ExpBur          :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbebbbeebeeeeebeeeeebeebebeebbbeeeeeebbbebbeebeeeb:    
Contact         :             b    b         bbb b  b  b  b                 bbbbb     b                              

queryA       827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
                :**                        **************************************************************************:
7cn9_C_1     814:TLXXXXXXXXXXXXXXXXXXXXXXXXQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 913
SecStr          :  ------------------------   SS B    SS HHHHHHHHHHHHHHHHHTTTHHHHSS     HHHHHHHHHHHHTS THHHHHHHHHHHHH:    
ExpBur          :ee------------------------eeeebeeeeeeebeeeeebebbbbbbbbbbebbeebeebeeeeeebeebbbebbeebebeeebbeeeeeebbee:    
Contact         :                            b     bb b b  b   b            b  bb bbbbbb  b   b       bbb  bb  b     

queryA       927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
                :***********************************************************  ***************************************:
7cn9_C_1     914:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1013
SecStr          :HHHHHHHHHHHHHSS  TTHHHHHHHHHHHHHHHHHHHHTT  TTSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbbebbeeeeeeeeebeebbebbeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbeebbeebbeebeeebeebeebbeebb:    
Contact         :                                        b        b bb bbbbb                                 b       

queryA      1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
                :****************************************************************************************************:
7cn9_C_1    1014:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1113
SecStr          :HHHHHHHTS    TTTSSSSEEEEEEE  BTTBEEEEEEEEEEE   B B  S EEETTEEEE SSSEEEBSSSS EEE TTS    B BSSSSEEEEES:    
ExpBur          :ebbbebbbbbeeeeebbeebebbbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebebbbeeeebbbbeebbbeeeebeeebbeeeeeb:    
Contact         :    b       b  b                                                                                    

queryA      1127:DVVIGIVNNTVYDP:1140
                :**************:
7cn9_C_1    1114:DVVIGIVNNTVYDP:1127
SecStr          :SSSSS B    B  :    
ExpBur          :eeeeeeeebebeee:

Protein Model on 7cn9_C_1_B_1 (TEMPLATE: 7cn9 )

Input Residue Numbers for Focused Sites