#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1011 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | O 1 (Q) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 801N 803S (identity: 100.0 %/90.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cn9_A_1 identity=90.6% |
queryA 27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126 :****************************************************************************************************: 7cn9_A_1 14:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 113 SecStr : EEE S B SSS SSEEEEEEEE SS EEE S SSS B SSEEEEEEESS S EEEESS SSSS EEEEE SS E: ExpBur :eebebebbbbbbeeeeeeeeeeeeeeeebbbeeeebeeeebeeeebeeeeeeeeeeeeeeeebbbbbbeeeeeebebbbbbeebeeeebbbbbeeeeeeb: queryA 127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226 :***************************************************** ********************************************: 7cn9_A_1 114:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLXXXQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 213 SecStr :EEE S S S SSSS SS S SSS EEE S SSS --- SSEEEEE BEESSSBEE EE EEEES SS BEE : ExpBur :bbebbbeeebeebbeeebeeeeebeeebeeeeebeeeeeeeeeeeeeebeeeb---eeeebbbbbbbbbeeebebbbbbbebebeeeeebeeeeebbebe: queryA 227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326 :****************************************************************************************************: 7cn9_A_1 214:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 313 SecStr : B S EE SSSS SSS S EEEE EEEEEEEEE TTS EEEEEESSSSHHHHHHHHTTSS SEEEEEE S : ExpBur :eeeebeeebeebeeeeeebbeeeeeeeeebeeeeeeeeebbbebeeeebbbebeeebebeeebbbeeeebbbbbbeeeeeebeebeeebeeeebeeeeeb: queryA 327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426 :****************************************************************************************************: 7cn9_A_1 314:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 413 SecStr :B SSS S HHHHT S TTT B SS TT SSSS S SS SSTTT B B B S STTGGG TT SSSHHHHT : ExpBur :ebbeeeeeebeeeeeeeeeeebbeeeeeeeeebeeebbbeeeeeeeeeeeeeeeeeeeeebebeebbbbebebeebbeeeeeeeeeebeeebbbeeeeee: queryA 427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526 :***************** ***** ************************************: 7cn9_A_1 414:DDFTGCVIAWNSNNLDSXXXXXXXXXXRLFRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 513 SecStr : B STT ---------- -------------------------------- SSSSSS B B SSSS SSB : ExpBur :eeeebbebbbebeeeee----------eeeee--------------------------------eeeeeeebeeeeeeebbebbbebbebeeeeeeeeeb: queryA 527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626 :*********************************************************************************************** : 7cn9_A_1 514:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPXXXXX: 613 SecStr : SS EE SSSEE SEEE TT S EETTTEE EE TTTT EEEE EEEEES TTT EEEE S S -----: ExpBur :bbeeeeeeeeebbebebeebebebebeebeeebeeeeeebeeeeeeebbbbbbeeeebbbbeebeeeebbbbbbbbeebeeebbbeeebeeeeee-----: queryA 627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726 : ********************************* *****************************************: 7cn9_A_1 614:XXXXXXXXXXXXXSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICAXXXXXXXXXXXXXSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 713 SecStr :------------- B TT EES S SSB SSS B ------------- SSS B TTEEE EE B EEE: ExpBur :-------------eeebebebbbbeebeeeeeeeeeebebeeebbe-------------eeeeeebbbbeebeeeeeeeeeeeeeeebbeebebebeeeb: queryA 727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826 :************************************************************************************* ************: 7cn9_A_1 714:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKXXXRSFIEDLLFNKV: 813 SecStr :EE EE HHHHHSSS HHHHHHHTTS THHHHHHHHHHHHHHHHHHHHHHHHTTSSS S TT TTTS TT --- HHHHHHHTTS: ExpBur :bbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebeebbeebbbebeeeeeeeeeeeeeeeebeebbeeeee---ebebbebbeeeb: Contact : b b queryA 827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926 :** **************************************************************************: 7cn9_A_1 814:TLXXXXXXXXXXXXXXXXXXXXXXXXQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 913 SecStr : ------------------------ SSEE SS HHHHHHHHHHHHHHHHHT THHHHSS HHHHHHHHHHHHT HHHHHHHHHHHHHH: ExpBur :ee------------------------eeeebbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeebeeebbee: queryA 927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026 :*********************************************************** ***************************************: 7cn9_A_1 914:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1013 SecStr :HHHHHHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHTT SS SSS HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :beebbeebeeebeeeeebbeebbeeeeebeebeeebeeeeeeeeebeeeebeebeeebeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebb: queryA 1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126 :****************************************************************************************************: 7cn9_A_1 1014:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1113 SecStr :HHHHHHHSS TTTSSSSEEEEEEE SSEEEEEEEEE EE EEE S B SSSEEEEESSSEEEE SS EEEE SSS BTTTEEEEEES: ExpBur :ebbeebbbbbbeeeeebbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebeebbbeeeebbeeeeeebbbeeeebebbbebeebeeebbeebbeeeeeb: queryA 1127:DVVIGIVNNTVYDP:1140 :**************: 7cn9_A_1 1114:DVVIGIVNNTVYDP:1127 SecStr :SS SS B B : ExpBur :eeeeeeeeeeeeee: |