#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1078 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | X 1 (C) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 717N 926Q (identity: 100.0 %/95.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7a94_C_1 identity=95.0% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :********************************************************* **************************************: 7a94_C_1 45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144 SecStr : S EEEEE S B SS SEEEEEEEEE TTEEEEEEE ----- EE SSEEEEEEESTT EEEEEEESS BSS: ExpBur :eeeebeeeeeeeeeebebeebbbbeeeeeeeeeeeeeeebebbbbeeebbebebeee-----ebebebeebebeebbbbbbbbebebbbbbbbbeebbbe: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7a94_C_1 145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244 SecStr :S EEEEEE SS EEEEEEEEEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEEEEE TT SSEEEEEEEEEEEETTEEEEEEEEEEEEES: ExpBur :eebbbbbebeeebbbbbbebebbebebbbbebeeeeeebeeeeebbeeeeeeeeeeeeeeeeebebeeeeeebeebebbbbbeeeeebbbbeeeeebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7a94_C_1 245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344 SecStr :SS S BEEEEEEE EEEEEEB BBSTTS S TTTS B EEEEEE EEEEEEEEE TT EEEEEETTS HHHHHHHHHT S SEEE: ExpBur :eebbeeeebbeeeeeeebebebeebbbbbbbbbbeebeeeebebbebbbbbbbbbebeebebbbebbeebebeebbbbeeebbbbbebeeeeeebeebeb: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7a94_C_1 345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444 SecStr :E S EE EE B B HHHHT S BGGG EEEE SEE SHHHHTT SEEEEESS GGGGGG EEEEEEEEEEEEETGGGGG STT: ExpBur :ebeebeeeeeeebebbeeeeeebeeeebbeeeebebbbebeeeebeebbeeeeebeeeeebeebebeeeeeeebbeebbbebebbbbbbbeebbebbbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7a94_C_1 445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544 SecStr : SHHHHHT TT EEEEEEE TTTT TT TT EEE SS TT EE SSS TT TTEE SEEE SSS TTTSEEEEEEE: ExpBur :eeeebbbbbbebbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeebeeeeeeeeeeeebeeeeeebbeebbebbebeeeeeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7a94_C_1 545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644 SecStr :EEE SSSS SEE S SSEEEEEETTEEEEEEEEE TT EE TTS EEE TTT EEEEE EE EEEEES TTT EEEET: ExpBur :bbeeeeeeebbbbeeeeeeeeeeebbebbbbebeeebebeebeeebeeeebebeeeeeeebbbbbeeeeebbbbeebeebbbbbbbbbeeebeebbbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :*********** ********************************************* *************************: 7a94_C_1 645:DVNCTEVPVAIXXXXXXXTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744 SecStr :T GGGSGGG ------- GGGSSSSSEEEETTEEEES EE S SEEEETTEEEE ------------ EEEE S SSEEE: ExpBur :ebebeebeebe-------ebeeebeeeeeeebeebbbbebeeeeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7a94_C_1 745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844 SecStr :EE EEEEEEEEEEE EE HHHHH SS HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHTT SS S STT GGGTSB TTSSS: ExpBur :bbeebebeeeeebbbbbbebbbbebeebbbeebeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeeeebeebebeebbeeeeeeb: Contact : b queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************* ***********************************************************: 7a94_C_1 845:KRSFIEDLLFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944 SecStr : BHHHHHHHHH ---------------------------- S EE SS HHHHHHHHHHHHHHHHHHTTHHHHSS HHHHHHHHHHTTT T: ExpBur :ebbebbeebeeee----------------------------eebeeeeeeebeeeebbeebebbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :*************************** ****************************************** **************************: 7a94_C_1 945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044 SecStr :HHHHTTHHHHHHHHHHHHHHHHHHTT --- HHHHHHHHHHHHHHHHHHHGGG TTSSSS HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebbeebee---ebeebeebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: Contact : b queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7a94_C_1 1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144 SecStr :HHHHHHHHHHHHHHHHHHHTSS STTSSSSSEEEEEEEEEETTEEEEEEEEEEE EEEEEE SEEESSSEEEEESSSEEEESSSSEEEE SSS B: ExpBur :bbeebeebbeebbebbeebbbbebeeeebbbeeebbbbbbbbbeebbbbbbbbbeebeeeebebbebbbeeeebbeeeebebbbeeeeebbbbeebeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7a94_C_1 1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177 SecStr : BTTSEEEEEETTS SSEEE B TTSSS : ExpBur :ebeeeebeeeeebeeeeeeeeeebeeeeeeeee: |