#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1080 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [875 aa] | Spike glycoprotein :SPIKE_SARS2 | 314Q 317N 319R 355R 381G 382V 383S 390L 396Y 463P 464F 465E 466R 471E 517L 518L 545G 546L 547T 557K 559F 562F 563Q 564Q 565F 566G 567R 568D 569I 571D 572T 589P 591S 592F 613Q 614D 646R 665P 668A 669G 697M 699L 700G 701A 702E 703N 704S 705V 707Y 708S 712I 713A 715P 957Q 961T 965Q 968S 970F 971G 995R 1002Q 1003S 1006T 1010Q 1013I 1039R 1040V 1041D 1045K 1046G 1072E 1074N 1077T 1079P 1089F 1090P 1094V 1121F 1123S 1128V 1130I 1145L (identity: 100.0 %/95.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6zgh_C_1 identity=95.1% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :********************************************************* **************************************: 6zgh_C_1 45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144 SecStr : EEE SS EE S S EEEEEEEE TT EEEB B ----- EEE S EEEEEEESS EEEEEEESS SSS: ExpBur :eeeebeeeeeeeeeebebeebbbbbeeeeeeeeeeeeeeeebbbbeeebebbebeee-----ebbbbbeeeebeebbbbbbbbebebbbbbbbbeeeeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 6zgh_C_1 145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244 SecStr :S EEEEEE SS EEEEEEEEEEEEEEEEEEEE SSS EEEEEEEEEEEEEEEEEEEE SSB EEEEEEEEEETTEEEEEEEEE B : ExpBur :eebbbbbbebeeeebbbbebebbebbbbbbebeeeeeebeeebeebeeeeeeeeeeeeeeeeeeebeeeeeebeebbbbbbbeeeeebebbeeeeebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 6zgh_C_1 245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344 SecStr :SS S EE EEEEE S EEEEEEEEEE TT SSSTTTS BEEEEEEE EEEEEEEEE TTSSEEEEEESSS HHHHHHHHHT S SEEE: ExpBur :eebbeeeebbeeeeebebebebeebbbbbbbbbeeebeeeebebbebbbbbbbbbebeeeebbbebbeebebeebbbbeeebbbebbbeeeeeebeeeee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 6zgh_C_1 345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444 SecStr :EEEE B B B STTTS S STT EEE SSB GGGSTTT SEEEEESS GGGTTS EEEEEEEEEE SSSGGGSSSS: ExpBur :eeeebeeeeeeebebbbeeeeebebeebbeeeebbbbbebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeeebbbbbebbbbbbbeebeebbeee: Contact :b b b b bbb b b queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 6zgh_C_1 445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544 SecStr : SSHHHHT TT EEEEEEE HHHH SS EEE SS SS SSS SSSS TT SEEE TTS STTS EEEEEE: ExpBur :eeeebbeebbbbbeebebbbbbbebbeebbeeebeeebebbeebeeebeeeeeeeeeebeeeeeeebeeeeeebbeebbeebebeeeeeeeebbbbbbbb: Contact : bbbb b queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 6zgh_C_1 545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644 SecStr :EEESSSS S S SSEEEEEETTEEEEEEEEE S TT EEE TTSSEEEEE TTT EEEEE S EEEEEES TTT EEEES: ExpBur :bbeeeeeebebbbbeebeeebeeebbebbbbbeeeebbbeebeeeeeeeebebeeeeeeebbbbbeeeebbbebeebeebbbbbbbbbbeeeeeebbbbe: Contact : bb bbb b b bbbbbbbb bb b bb b queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :**** ******************************************** *************************: 6zgh_C_1 645:DVNCXXXXXXXXXXXXXXXWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744 SecStr :S --------------- S S EEEETTEEEES EE S SEE SSSEEE ------------ S EEEE S SSEEE: ExpBur :ebee---------------eebeeeeeeeeebebbbbbebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee: Contact :b b b bb b bbbbbbb bb bb queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 6zgh_C_1 745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844 SecStr :EE EEEEEEEEEEE EEE HHHHH SS SHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHT SS S SSS TTSS TTSSS: ExpBur :beeebebebeeebbbbbbebbebebeebbbeebeebeeebeeeeeebeebeeebeebbeebeebbeebbbebeeeeeeeeeeebeebebebbeeeeeeeb: Contact : b queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************* *********************************************************************: 6zgh_C_1 845:KRSFIEDLLFNKVXXXXXXXXXXXXXXXXXXAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944 SecStr :S HHHHHHHHH ------------------ SSHHHHHHTTT EEE SS HHHHHHHHHHHHHHHHHTTTSTTSSS HHHHHHHHHHHHT H: ExpBur :ebbebbbebeeee------------------eeeeeeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeebebeebbbebbeeeebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :*************************** ****************************************** **************************: 6zgh_C_1 945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044 SecStr :HHHHHSHHHHHHHHHHHHHHHHHHHH --- STTTHHHHHHHHHHHHHHHGGG SSSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbebbeebbeebeeebee---ebeebeebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: Contact : b b b b bb b bb b b b queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 6zgh_C_1 1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144 SecStr :HHHHHHHHHHHHHHHHHHTTSS TTSSSSSEEEEEEEEEETTEEEEEEEEEEE EEEEEEES EE SSBEEEESS EEEESSS EEEE SSS B: ExpBur :bbeebeebbeebbebbeebbbbebeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeeeebbbeebebee: Contact : bbb bb b b b b bb b queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 6zgh_C_1 1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177 SecStr : TTSEE SBSTT SS EE TTHHHH : ExpBur :ebbeeebeeeeebeeeeeeeebebeeeeeeeee: Contact : b b b b b |