#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1060 aa] | Spike glycoprotein :A0A6B9WHD3_CVHSA | |
2 | b | AB 1 (C) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 61N (identity: 100.0 %/91.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6zgf_C_1 identity=91.6% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :***** ********** ***************** **************** ************************************: 6zgf_C_1 45:QCVNLXXXTQLPPAYTNSSTRGVYYPDKVFRSSVLHLTQDLFLPFFSNVTWFHXXXXXXXXXXXRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144 SecStr : --- EEEEESEEEEE SS S EEEEEEEE TTEEEEE ----------- EE S EEEEEEESS EEEEEEESS SSS: ExpBur :eeeee---eeeeeeebebbebbbbbbeeeeeeeeeeebeeebbbbeeebbebe-----------eeeeeebebeebbbbbbbbeeebbbbbbbbeebeee: Contact : b queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :******************************* ********************** ****************************: 6zgf_C_1 145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYXXXXXXXWMESEFRVYSSANNCTFEYVSQXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLV: 244 SecStr :S EEEEE SS EEEEE EEEEEEEEEEE ------- EEEEEEEEE EEE ------------ EEEEEEEEEETTEEEEEEEEEE : ExpBur :eebbbbbeeeebeebbbbebebbebbbbbbe-------eeeeeeebeeeeeeeeeeeeee------------eeebebbbbbeeeeebbbbeeebeeeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :**** **************************** ****************************************************: 6zgf_C_1 245:RDLPPGFSALEPLVDLPIGINITRFQTLLALHRXXXXXXXXXXXXXXXAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344 SecStr :SS SEEEEEEEEEE EEEEEEEEE --------------- EEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHTSS SB : ExpBur :eebbeeebbbeeeeebebebebeebbbbbbbee---------------ebbbbbbebeebbbbbebeeebebeebbbbbbebbbbbbbeeeeeebeeeee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :********** ********************* ************************* ****************************** **********: 6zgf_C_1 345:QTSNFRVQPTDSIVRFPNITNLCPFGEVFNATTFASVYAWNRKRISNCVADYSVLYNSTSFSTFKCYGVSPTKLNDLCFTNVYADSFVITGDEVRQIAPG: 444 SecStr :B S EEEEE SB TTTTTT SS BGGG EEEEE SEE GGGGTTT SEEEESSS GGGSSS EESEEEEEEEEEEGGGGGGSSTT: ExpBur :ebeeebbeeeeebbbbeeeeeebebeebbeeeebbbbbebeeeebeebbbebeebeeeeeeeeeebeeeeeeebeebbbbbbebbbbbbbbebbebbbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :************************* * * *** ********* ****************** **** * *** ** *** ** *** ********: 6zgf_C_1 445:QTGKIADYNYKLPDDFTGCVIAWNSKHIDAKEGGNFNYLYRLFRKANLKPFERDISTEIYQAGSKPCNGQTGLNCYYPLYRYGFYPTDGVGHQPYRVVVL: 544 SecStr : SSHHHHT SS EEEEEEE HHHH TT TT EEE SS TT EE SSS SS SSEE SEEE TT GGGSEEEEEEE: ExpBur :eeeebbbebbebbeebebbbbbbebeeebbeeebbeebbbbeebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeebeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :***** **********************************************************************************************: 6zgf_C_1 545:SFELLNAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644 SecStr :EEE SS SEE S SSEEEEEETTEEEEEEEEE SS EEE TTSSEEEEE SSS EEEEE S EEEEB TTT EEEET: ExpBur :bbeeeeeebebbbeeeeeeeeeeebbebbbbeeeeebbbeebeeebeeeebbbeeeeeeeebbbbbeeeebbbbeebeeebbbbbbbbbeebeebbbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :**************************************************************** *************************: 6zgf_C_1 645:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQX----XXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 740 SecStr :T SSSHHHHTTTTSS TTGGGTTSSSS EEETTEEEES EE SS SEEEETTEEEEEE ----------- EEEEEE TTEEE: ExpBur :ebebeebeeebbbeebeeebeeebeeeeebebebbbbbebeebeeeeeeebebeeebbbbeeee-----------eeebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 6zgf_C_1 741:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 840 SecStr :EE EEEEEEEEEEE EEEE HHHHHT S SSTTTSTTSS STTHHHHHHHHHHHTHHHHHHHHHHTT S SS TTTS SSSGG: ExpBur :bbeebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeeeeebeeebeebbeebbebbeebbbebeeeeeeeeeeebeebebeebbbeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :*************** ******* ******************************************************************: 6zgf_C_1 841:KRSFIEDLLFNKVTLXXXXXXKQYGDCLXXXXXXDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 940 SecStr :G HHHHHHHHHS ------ HHHH ------ HHHHHTTTEEEE SS HHHHHHHHHHHHHHTTTT SGGGSSS HHHHHHHHHHTTT H: ExpBur :ebbebbbbbbeebee------eeeeebe------eeebebeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 6zgf_C_1 941:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1040 SecStr :HHHHHSHHHHHHHHHHHHHHHHHHHHS GGGS TTTHHHHHHHHHHHHHHHGGG SSSS S TTTTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebbeebeeeeeebeebbebbeebeebbeebbeebeeeeebeeeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 6zgf_C_1 1041:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1140 SecStr :HHHHHHHHHHHHHHHHHHHTSS STTTSSSSEEEEEEEEEETTEEEEEEEEEEE SEEEEEEES EESSS EEEESSSEEEESSS EEEEETTEEEEE: ExpBur :ebeebbeebeebbebbeebbbeebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebbbbbeebeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPE:1144 :*********** *******************: 6zgf_C_1 1141:IITTDNTFVSGSCDVVIGIVNNTVYDPLQPE:1171 SecStr :E BTTSEEE S TTTSTT EE B TTS : ExpBur :ebbeebbeeeeeeeeeeeeeeeebeeeeeee: |