#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6zge_B_1_N_1

Protein Model on 6zge_B_1_N_1 (TEMPLATE: 6zge )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [1098 aa] Spike glycoprotein :SPIKE_SARS2
2 b N 1 (N) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 28Y 61N (identity: 100.0 %/96.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6zge_B_1 identity=96.7%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :*********************************************************     **************************************:
6zge_B_1      45:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVXXXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 144
SecStr          :             EEEEESS   B  SS    SEEEEEEEEE  TTEEEEEEEE   -----       EEE SS EEEEEEESS    EEEEESS BSS:    
ExpBur          :eebebeeeeeeeeeebebeebbbbbbeeeeeeeeeeebeeebbbbeeebebbebeee-----ebbbbbeebebeebbbbbbbbbbebbbbbbbbeebeee:    
Contact         :              b                                b                                                    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
6zge_B_1     145:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 244
SecStr          :S EEEEEE SS EEEEEE EEEEEEEEEEEEEETTTTEEEEEEEEEEEEE    EEEE            SSEEEEEEEEEEEETTEEEEEEEEEEEEES:    
ExpBur          :eebbbbbeebebebbbbbebebbebbbbbbebeeeeeeeeeebeebeeeeeeeeeeeeeeeeeeebeeeeeebeebebbbbbeeeeebebbbeeeebebe:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :****************************************************************************************************:
6zge_B_1     245:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 344
SecStr          :SS       BEEEEEEE      EEEEE EEEE TTS S TTTS B   EEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHTSS   SEEE:    
ExpBur          :eebbeeeebbeeeeebebebebeebbbbbbbbbbeebeeeebebbbbeebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
6zge_B_1     345:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 444
SecStr          :E         EEEEE     SB  TTTTSS S   BSTT EEEEE S B  GGGGTTT   SEEEEESS GGGGGG   EEEEEEEEEEEGGGGGGSSTT:    
ExpBur          :ebeebeeeeeeebbbbeeeeeebebeebbeeeebebbbebeeeebeebbbeeeebeeeeeeeeeebbebeeeebeebbbbebebbbbbbbeebbebbbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
6zge_B_1     445:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 544
SecStr          :  SHHHHHT    SS  EEEEEEE HHHH  SS B   EEE   SS   TT        EE SSS  SS   TTEE SEEE  B SSS GGGSEEEEEEE:    
ExpBur          :eeeebbbebbebbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeeeeeeebbbbbbbe:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
6zge_B_1     545:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 644
SecStr          :EEE SSS  S   S        SSEEEEEETTEEEEEEEEE      TT  EEE TTS EEEEE TTT  EEEEE S    EEEEES TTT S  EEEET:    
ExpBur          :bbebeeeebebbbeeeeeeebeeebbebbbbbbeeebbbeebeeebeeeebbbeeeeeebebbbbbeeeebbebeebeebbbbbbbbbbeeeeeebbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :****               ********************************************            *************************:
6zge_B_1     645:DVNCXXXXXXXXXXXXXXXWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 744
SecStr          :T   ---------------  SS   S EEEETTEEEES EE S     SEEEETTEEEEEE ------------  EEEEEE            SS EE:    
ExpBur          :ebee---------------eebeeeeeeeeebeebbbbebeeeeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
6zge_B_1     745:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 844
SecStr          :EE SEEEEEEEEEEE    EEEE HHHHHTTT HHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHH S        SS  STT   TTTS  TTSSS:    
ExpBur          :bbeebebebeeebbbbbbbbbebebeebbbeebeebeeebeeeeeebeebeeebeebbeebeebbeebbbebeeeeeeeeeeebeebebeebbeeeeeeb:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :****************************************************************************************************:
6zge_B_1     845:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 944
SecStr          :   HHHHHHHTSS  S S S   GGGS SSSBTTBHHHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHHTTGGGTSS     HHHHHHHHHHTTT  H:    
ExpBur          :ebbebbbbbbeebeeeeeeeeeeeeebeeeeeeeeebbbbeeebbeeeeeeeeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :***************************   ******************************************  **************************:
6zge_B_1     945:NVLYENQKLIANQFNSAIGKIQDSLSSXXXALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1044
SecStr          :HHHHHSHHHHHHHHHHHHHHHHHHH  ---  HHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebeeebee---ebeebeebbeebeebbbebeeeeeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
6zge_B_1    1045:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1144
SecStr          :HHHHHHHHHHHHHHHHHHHTSS   STTTTSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEEES EESSS EEEESSSEEEESSS EEEEETTEEEEE:    
ExpBur          :ebeebeebbeebbebbeebbbeebeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeeeebbbeebbeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146
                :*********************************:
6zge_B_1    1145:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1177
SecStr          :   TTTEEE S SSS TT EE     TTHHHH :    
ExpBur          :ebbeeebeeeeebeeeeeeeeeebeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123