[pdbjlvh2]Protein Model on 6xm3_A_1_D

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6xm3_A_1_D_1

Protein Model on 6xm3_A_1_D_1 (TEMPLATE: 6xm3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [1038 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		D 1 (D)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	108T 234N 236T (identity: 100.0 %/92.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6xm3_A_1 identity=92.4%

queryA        27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
                :*******************************************          ***********************************************:
6xm3_A_1      14:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 113
SecStr          :  EE TT  EE  SS    S EEEEEEEE  TT EE  B    ----------    EE  S EEEEEEESS  EEEEEEESS BSSS EEEEEE SS E:    
ExpBur          :eebebbebbbbeeeeeeeeeeeeebeebbbbbeeebeebebee----------eeeebebeebbbbbbbbeeeebbbbbbbbebeeeeebbbbbeeeeee:    
Contact         :                                                                                 b                  

queryA       127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
                :*****************               ***************            *****************************************:
6xm3_A_1     114:VIKVCEFQFCNDPFLGVXXXXXXXXXXXXXXXVYSSANNCTFEYVSQXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 213
SecStr          :EEE    B  SS  EE ---------------     SS   EEEE ------------  EEEEEEEEEETTEEEEEEEEEE   SSS  SS  EEEEE:    
ExpBur          :ebbbbebebeeebbbee---------------eeeeeeeeeeeeeee------------eeebebbbbbeeeeebebbeeeeebeeeeebeeeeebbeee:    

queryA       227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
                :************************             ***************************************************************:
6xm3_A_1     214:VDLPIGINITRFQTLLALHRSYLTXXXXXXXXXXXXXAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 313
SecStr          :EEE       EEEEEEEESS    ------------- EEEEE EEEEEEEEE TTS EEE  BTTSSHHHHHHHHHT S   SEEEEE        EE :    
ExpBur          :eebebebebeebbbbbbeeeeeee-------------ebbbbebeebebbbebbeebebeebbbbbbebbbbbbbeeeebebeeeeeebeeebeeeeeeb:    
Contact         :       b b                                                                                          

queryA       327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
                :****************************************************************************************************:
6xm3_A_1     314:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 413
SecStr          : B         STTTSS S    TTS EEEEE SEE  SHHHHTSTT SEEEESSS GGGGGG B S EEEEEEEE SGGGGGSSSS  SSHHHHT    :    
ExpBur          :bbbeebeeebebeebbeeeebebbebbeeeebeebbbebeebeeeeeeeeeebeebeeeebbeebbbebebbbbbbbbebeebbbeeeeeebbbebbbbb:    

queryA       427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
                :******************  ********************************************************************************:
6xm3_A_1     414:DDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 513
SecStr          :SS  EEEEEEE HHHH  --     EE    SS   TT        EE SS   SS   TTEE S EE    TTS TTSS EEEEEEEE  SSS   EE :    
ExpBur          :eebbbbbbbbebbeebbe--ebeebebbbeeeeebeeeeeeeeeebeeeeeeebeeeeeeebeebbebbebeeeeeeeebbbbbbbbbbeeeeeebebbb:    

queryA       527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
                :****************************************************************************************************:
6xm3_A_1     514:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 613
SecStr          :S        SSEEEEEETTEEEEEEEEE      SS SEEE TTS EEEEE TTT  EEEEE      EEEEE  TTT    EEEEET TTTSHHHHTTG:    
ExpBur          :eeeeeeeeeeebbebbbeebeeebbbeeeeeeeeeeeeebeeeeeeeebbbbbeeeebbebeebeeeebbbbbbbbeebeebbbbbeebebeebeeebbb:    

queryA       627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
                :**************************************************            **************************************:
6xm3_A_1     614:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 713
SecStr          :GGS TTTGGGGSSS EEE SSEEEES EE S     SEEEETTEEEEEE ------------  EEEEEE   S        TTEEEEEEEEEEEEEEEE:    
ExpBur          :eebeeebeeebeeeeebebeebbbbebeeeeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb:    

queryA       727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
                :****************************************************************************************************:
6xm3_A_1     714:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 813
SecStr          :EE    EEEE HHHHHSTT HHHHHHHGGG SHHHHHHHHHHHHHHHHHHHHHHHHTT SS     S   STT   TTTS  SSSSS   TTHHHHHHH :    
ExpBur          :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebeebbeebbbebeeeeeeeeeeebeebebeebbeeeeeeeebbebbebbbeeb:    

queryA       827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
                :**                   *******************************************************************************:
6xm3_A_1     814:TLXXXXXXXXXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 913
SecStr          :  ------------------- HHHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHHTTGGGSSS     HHHHHHHHHGGGT  THHHHHTHHHHHHH:    
ExpBur          :ee-------------------eeeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbee:    

queryA       927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
                :***********************************************************  ***************************************:
6xm3_A_1     914:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1013
SecStr          :HHHHHTTTTHHHHSS    HHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebeeebeeeeeebeebbebbeebeebbeebeeebeeeeebeeeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebbeebeebb:    

queryA      1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
                :****************************************************************************************************:
6xm3_A_1    1014:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1113
SecStr          :HHHHHTTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSEEEEESSSEEEESSS EEEE SSS   B  BSSSEEEEEET:    
ExpBur          :ebbeebbbbbbeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbbeeeebbbbbeebeeeeebbeebbeeeeeb:    

queryA      1127:DVVIGIVNNTVYDPLQPELDS:1147
                :*********************:
6xm3_A_1    1114:DVVIGIVNNTVYDPLQPELDS:1134
SecStr          :TSSTT EE   B TTSSTT  :    
ExpBur          :eeeeeeeeeebeeeeeeeeee:

Protein Model on 6xm3_A_1_D_1 (TEMPLATE: 6xm3 )

Input Residue Numbers for Focused Sites