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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [424 aa] | IMPORTIN SUBUNIT ALPHA-1A :IMA1A_ORYSJ | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [14 aa] | T-DNA BORDER ENDONUCLEASE VIRD2 :VIRD2_AGRT5 | 104L 105S 106R(I) 107E 110P 138F 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 188N 191G 192D 228N 231W 234S 235N 238R 270D 280D 315R 319N 321V 322T 323G 328T 353K 354E 357W 360S 361N 364A 396E 399W 403N 406S 407G (identity: 97.7 %/52.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4bqk_A_1 identity=52.3% |
queryA 77:SVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHA: 176 :* * * ** ** ***** * *** * * * ** ** * * *** ************* ** * * ** * * ** * : 4bqk_A_1 3:SLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSD: 102 SecStr :THHHHHHHHHSS HHHHHHHHHHHHHHHT SSS HHHHHHTT HHHHHHHTT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S H: ExpBur :eeeebeebbebeeeeebbebbbebbeebeeeeeebbeebbebebbebbbebbebeebeebbebbbebbbbbbeeeeebbeebbeeebbeebbebbebebe: Contact : bbbb b b b b bbbbb b queryA 177:HISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS: 276 : ********* *** **** ** **** * * *** ****** ** * * * ** * ** * * *** * *** *: 4bqk_A_1 103:DVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSM----LRNATWTLSNFCRGK-PQPSFEQTRPALPALARLIHSNDEEVLTDACWALS: 197 SecStr :HHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHT TT HHH----HHHHHHHHHHHH SS-S HHHHTTHHHHHHHHTT HHHHHHHHHHHH: ExpBur :ebbbbbbebbbbbbeeeeebbeebbeeebbeebbebbeeebeeeb----eebbbebbbbbbeee-eebebeebeebbebbbebbebebeebbebbbebbb: Contact : b b b bb b b bb b b queryA 277:YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVN: 375 :** ** * * * ** * ** ** **** ****** * *** ** ** **** * * * *** ** ****** **** * *: 4bqk_A_1 198:YLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVIN: 297 SecStr :HHTSSSHHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHTTTHHHHHHHHHHS HHHHHHHHHHHHHHHTS HHHHHHHHH: ExpBur :bbbeeeeebbebbbeeebbebbbebbebebeebbebbbebbbbbbebeeebbeebbeeebbebbeebbeeeeeeebbebbbebbbebbebeeebbebbbe: Contact : b b b bbb b bb b bb b queryA 376:HGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEK---------LSIMIEE: 466 : * ** * * * *** ** * **** ** *** * * ** ** * * * * ** * *** * * ** *: 4bqk_A_1 298:AGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENIL----KVGETDKTLAAGDVNVFSQMIDE: 393 SecStr :HT HHHHHHHHHHS HHHHHHHHHHHHHHHHH HHHHHHHHHTT HHHHHHGGGSS HHHHHHHHHHHHHHH----HHHHHHHHHTT S HHHHHHHH: ExpBur :eebbeebbebbeebeeebebbbbebbbbbbeebeeebbeebbeeebbebbbebbebebeebbbbbbebbbbbb----ebbeeeeeeeeeeebebbeebee: Contact : b b b bb queryA 467:CGGLDKIEALQNHENESVYKASLSLIEKYF: 496 : ** *** ** * * * * * : 4bqk_A_1 394:AEGLEKIENLQSHDNNEIYEKAVKILEAYW: 423 SecStr :TTHHHHHHHHTT S HHHHHHHHHHHHHH : ExpBur :bebbebbeebeeeebeebeeebeebbeebe: |