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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [466 aa] | SRP1 isoform 1 :A0A6A5Q590_YEASX | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [950 aa] | Importin alpha re-exporter :CSE1_YEAST | 34V(Q) 35N(Q) 36V 37E 38L 39R 40K 42K 387S(E) 388K(V) 390D(E) 391F(Y) 406S 409T(L) 410V(Q) 423E(K) 427N(D) 430T(E) 431A(I) 432K(A) 433D 434T(N) 435K(R) 438L(E) 457T(A) 459K(G) 460L 461S(N) 462I 465E 466E(K) 468G 471D(E) 480E 481N 483S(K) 500E 501E(D) (identity: 39.5 %/46.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1wa5_B_1 identity=46.9% |
queryA 26:EMRRRRIEVNVELRKAKKDDQMLKRRNVSSFPDDATSPLQENRNNQGTVN------WSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAG: 119 :* **** ******* * **** ** ** ** * ** **** * **: 1wa5_B_1 31:ELRRRRDTQQVELRKAKRDEALAKRRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXQELPQMTQQLNSDDMQEQLSATVKFRQILSQXXRPPIDVVIQAG: 130 SecStr : TTS S S S ---------------------------- HHHHHHHHHSS HHHHHHHHHHHHHHH -- HHHHHHTT: ExpBur :eebeebeeeeeeeeeeeeebbeebeebe----------------------------eeeeebbebbeeeeeeebbebbebbeeebbe--ebebeebeebe: Contact : bbbbbbb b queryA 120:LIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMS: 219 : * * * * * ************ *** *** * * ** ** *** ***** *** ** * * * * * : 1wa5_B_1 131:VVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----N: 225 SecStr : HHHHHHTTSTTS HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHHHHS HHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHGG-----G: ExpBur :bbeebbebbeeeeeeebbbbbbbbbbbbbbbeeebbeebbebebbebbbebbeebeeebebbbbbbbbbbbebeeebbbebbebebbebbeebb-----e: queryA 220:SLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGN: 319 :* * ********* * * * * * **** * * * * * ******* *** * * * ** ** ****** **: 1wa5_B_1 226:SNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGN: 325 SecStr : HHHHHHHHHHHHHHH SSS HHHHGGGHHHHHHHTT HHHHHHHHHHHHHHTSSSHHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHH: ExpBur :eeeeebbebbbbbbbbbbeeeeeebeeeebbebbebbbebbeeebeebbbbbbbbbbbbbbbeeebbebbbeeebbebbbebbebebeebbbbbbbbbbb: queryA 320:IVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLV: 417 :**** * ****** ** * ** ** ** *** ** ****** *** * * * ** * * ** *** ** * *** * ***: 1wa5_B_1 326:IVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLV: 425 SecStr :HTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHHHHHHHHHHHHHHTTTSHHHHHHHH: ExpBur :bbbbeeebbeebbeeebbebbeebbebeeeebbbbbbbbbbbbbbbebebbebbbebebbeebbebbeebeeebbebbbbbbbbbbebbeeeeebbeebb: Contact : bb bb b bb queryA 418:HCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEE: 501 : * * ** ** * ** * *** ** * * * * ** ** ** * ** * ** ** ** : 1wa5_B_1 426:SQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFGEEED: 514 SecStr :HTT HHHHHHHTTT HHHHHHHHHHHHHHHHHHHHHHHHHT SS HHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHSS : ExpBur :eeebbebbbebbeebeeebbbbbbebbbbbbebbeebbeeeeeeebebbeebeebebeebbeebbeeeeeebeeebeebbeebbeeeee: Contact : b b bbbbbb b b bbbb b b bb b b bb b bb |