[pdbjlvh2]Protein Model on 6wx9_A

Protein Model on 6wx9_A_1 (TEMPLATE: 6wx9 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IMA1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [424 aa]	Importin subunit alpha-5 :IMA5_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6wx9_A_1 identity=50.8%

queryA        80:DIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRA-GLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHI: 178
                :*    * *   * ** ***  ***** *  ****  *   *    ** ** *      ****** ******* * **  *   ** * ** ** *     :
6wx9_A_1      15:DMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDV: 114
SecStr          :HHHHHHH S HHHHHHHHHHHHHHH  SS   HHHHHTSTTSHHHHHHHTT TT HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHHT S HHH:    
ExpBur          :ebeebbeeeeeeebeebbeebbeebeeeeeebbeebeeeeebbebbbebbebeeeeebbebbbebbbbbbeeeeebbeebbeeebbebbbebbebeeeeb:    

queryA       179:SEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYL: 278
                : *************    ** *       *** *              **  * ****** * * *    *   *  *  **   *  **** *** ***:
6wx9_A_1     115:QEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMT----RNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL: 210
SecStr          :HHHHHHHHHHHHTS HHHHHHHHHTT HHHHHGGGG  S HHHH----HHHHHHHHHHH   SS   HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHH:    
ExpBur          :bbbbbebbbbbbeeeeebbeebbeeebbebbeebbeeeebeebb----ebbbebbbbbbeeeeeebeeeebeebbebbbebbeeebeebbbebbebbbeb:    

queryA       279:TDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL: 378
                : ****  *  *   **   ** **       * ***** ****** * ****     **     **  **  * *** ** ******   *** *     :
6wx9_A_1     211:SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANI: 310
SecStr          :TSSSHHHHHHHHHT  HHHHHHHHT SSHHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTT :    
ExpBur          :beeeeebbeebbeeebbeebbebbebeeeebbbbbbebbbbbbeeeeebbeebbebebbebbeebbebeeeebeebbbebbbebbebeeebbeebbeeeb:    

queryA       379:VPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473
                : * * * *  * * * *** ** ** ****  *** ***  * * **  ***  * **  * *    **    *         *      ***  *****:
6wx9_A_1     311:FPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKI: 410
SecStr          :HHHHHHHHHHS HHHHHHHHHHHHHHHHS  TTHHHHHHHHT HHHHHHGGGSS HHHHHHHHHHHHHHHHHHHHHHHH SSSS THHHHHHHTTHHHHH:    
ExpBur          :bebbbebbeebeeebebbbbebbbbbbeebbeebbebbbeeebbebbbebbeeeeeebbebbbebbebbbebbeeebeeeeeeebebbeebeebebeeeb:    

queryA       474:EALQNHENESVYKASLSLIEKYF: 496
                :* ** ***   *     *** **:
6wx9_A_1     411:EFLQSHENQEIYQKAFDLIEHYF: 433
SecStr          :HHGGG S HHHHHHHHHHHHHH :    
ExpBur          :eebeeeeeeebeeebeebeeebe:

Protein Model on 6wx9_A_1 (TEMPLATE: 6wx9 )

Input Residue Numbers for Focused Sites