[pdbjlvh2]Protein Model on 6s9o_D

Protein Model on 6s9o_D_1 (TEMPLATE: 6s9o )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IMA1_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [334 aa]	designed Armadillo repeat protein with internal Lock1 fused to target peptide KRKRKLKFKR

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6s9o_D_1 identity=37.7%

queryA       164:IPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCR--NKNPAPPIDAVEQILPTLVRLLH: 261
                : *     * **       *   *  **  *      **  **   *  **  *         *    * ***     *      ***    ** ** ** :
6s9o_D_1       6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-----ILQEALWALSNIASGGNEQIQAVIDA--GALPALVQLLS:  98
SecStr          :HHHHHHHHT S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHTT S HH-----HHHHHHHHHHHHTTS HHHHHHHHHT--THHHHHHHHHT:    
ExpBur          :eeebbeebebeeeeebbebbeebbeebeeeeeebeebbeeebbebbbebbeeeeee-----bbbbbbebbbbbbbbeeebbbbbbee--ebbeebbebbe:    

queryA       262:HDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSN: 361
                :      *    **      * ** *  *   *  * ** **      *   ** *  **  *  ** * *******     **  *   *   * *  **:
6s9o_D_1      99:SPNEQILQEALWALRNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILSSALGALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQLALWALSN: 198
SecStr          : S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHH:    
ExpBur          :eeeeebbbbbbbbbbbbbbbeeebbebbbeeebbeebbebbeeeeeebbbbbbbbbbbbbbbbeebbeebbeeebbeebbebbeeeeeebbebbbbbbbb:    

queryA       362:ITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLS: 461
                :*  *   *** *   *  * **  **        ** **  *  ***  ***      *    *  **      *    * * ***       *   *  :
6s9o_D_1     199:IASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN-EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG----GNEQKQA: 293
SecStr          :HHTS HHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHTTS H-HHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHSSS---- HHHHHH:    
ExpBur          :bbbbbeebbebbbeeebbebbbebbeeeeeebbebbbbbbbbbbbbee-ebbeebbeeebbeebbebbeeeeeebbbbbbebbbbbbee----beebbeb:    

queryA       462:IMIEECGGLDKIEALQNHENESVYKASLSLIEKY: 495
                :    * * * * * ** ****   *      ** :
6s9o_D_1     294:--VKEAGALEKLEQLQSHENEKIQKEAQEALEKL: 325
SecStr          :--HHTTTHHHHHHHHTT S HHHHHHHHHHHHH :    
ExpBur          :--beeeebeeebeebeeeeeeebeebbeebeeee:

Protein Model on 6s9o_D_1 (TEMPLATE: 6s9o )

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