Protein Model on 5x8n_A_1_B_1
(TEMPLATE: 
5x8n
)Protein Model on 5x8n_A_1_B_1
(TEMPLATE: 5x8n
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [425 aa] | Importin subunit alpha-1 :IMA1_MOUSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [8 aa] | Epstein-Barr nuclear antigen leader protein :EBNA5_EBVB9 | 104L 105S 106R 107E 110P 138F 142W 146N 149S 150G 151T 152S 155T 181Q 184W 188N 191G 192D 228N 231W 234S 235N 238R 270D 277Y (identity: 100.0 %/94.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5x8n_A_1 identity=94.4% |
queryA 73:TVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA: 172
:****** ******** * * ************************************* ******************************************:
5x8n_A_1 4:TVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA: 103
SecStr : S HHHHHHHHTT HHHHHHHHHHHHHHHT SS HHHHHHTT HHHHHHHHT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT:
ExpBur :eeeeeeeebeebbeeeeeeebbebbebbbebbeeeeeebbeebeeeebbeebbebbeeeebeebbbbbbebbbbbbeeeeebbeebbeeebbeebbebbe:
Contact : bbbb b b b b bbbb b
queryA 173:SPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTC: 272
:********************** ******* ** *********** * ************************* **************** ******* *:
5x8n_A_1 104:SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSC: 203
SecStr : S HHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHTT SS GGGS HHHHHHHHHHHHHHT SS HHHHHHHHHHHHHHTT S HHHHHHHH:
ExpBur :beeeebbebbbebbbbbbeebbebbeebbeeebbeebbeebeeeebeebeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbebebeebbbebb:
Contact : b b b bb b b bb b b
queryA 273:WAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQ: 372
:************** **** ************ ************************ ******************************************:
5x8n_A_1 204:WAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQ: 303
SecStr :HHHHHHTSS HHHHHHHHTTT HHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTGGGGHHHHTT SSHHHHHHHHHHHHHHTTS HHHHHH:
ExpBur :ebbbebbeeeeebbebbbeeebbebbbebbeeeeeebbbbbbebbbbbbebeeebbbebbeeebbebbeebbeeeeeebbebbbebbbebbebeeebbee:
Contact : b
queryA 373:VVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDK: 472
:*********** ************* ** **************************** ******* **********************************:
5x8n_A_1 304:VVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDK: 403
SecStr :HHHTT HHHHHHHHHSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHHHTTT HHHHHHHHHHTTHHHH:
ExpBur :bbeeebbeebbebbeeeebebbeebbebbbebbeebbbebbeebbeeebbebbbebbebebeebbebbbebbebbbebbeeeeeeeebbeebeeeebbee:
queryA 473:IEALQNHENESVYKASLSLIEKYFS: 497
:***** *********** *******:
5x8n_A_1 404:IEALQRHENESVYKASLNLIEKYFS: 428
SecStr :HHHGGG SSHHHHHHHHHHHHHH :
ExpBur :beebeeeeeeebeeebeebbeebee:
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[assembly_id:1]
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