Protein Model on 5mfj_A_1_C_1 (TEMPLATE: 5mfj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IMA1_HUMAN) A 1 (A) polymer(polypeptide(L)) [239 aa] YIII(Dq.V2)4CqI
2 b C 1 (C) polymer(polypeptide(L)) [6 aa] (KR)5 365G 366R(N) 367Q(N) 370I 406S 407G 408G(N) 409T(N) 413I 438L(Q) 439V(E) 442D(W) 446N 449Q(S) 455G 483S(E) (identity: 43.8 %/34.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5mfj_A_1 identity=34.9%
queryA       253:LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQ: 352
                :**  *  *   *   *       *    * ** *      *    *****          *  ** **  *  ** *  * ****     **        :
5mfj_A_1       6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVI: 105
SecStr          :HHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHTTSSS HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHHHHS HHHH:    
ExpBur          :eeebbeebebeeeeebbebbeebbebbeeeeeebeebbeeebbeebbebbeeeeeebbbebbebbbbbbebeeebbeebbeeebbebbbebbeebeeebb:    

queryA       353:KEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE: 452
                : ** *   **  *   ***     *    **  *  *      *****  *  **   ***  *   *   **  **       *     ** **     :
5mfj_A_1     106:QEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNN-EQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIAS---: 201
SecStr          :HHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHHHHHHHHHHHHTS H-HHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHHT---:    
ExpBur          :ebbbbbbbbbbebeeebbeebbeeebbebbbebbeebeeebbeebbebbbbbbebee-ebbeebbeeebbebbbebbeeebeebbbebbebbbbbbe---:    
Contact         :            bbb  b                                   bbbb   b                        bb  b   b  b   

queryA       453:KLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS: 497
                :  *  *      ** *     * **   ** * *      *   *:
5mfj_A_1     202:--GNNEQIQ-KLEEAGAEPALEKLQSSPNEEVQKNAQAALEALNS: 243
SecStr          :--S HHHHH-HHHHTTHHHHHHHHTT S HHHHHHHHHHHHHH  :    
ExpBur          :--beeebbe-ebeeeebeebbeebeebebeebeeebeebbeebee:    
Contact         :  b                           b                                                                     


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