[pdbjlvh2]Protein Model on 5mfg_B_1_D

Protein Model on 5mfg_B_1_D_1 (TEMPLATE: 5mfg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [269 aa]	YIIIM5AII
2	b		D 1 (D)	polymer(polypeptide(L)) [241 aa]	YIIIM5AII	174P 175H(N) 176A(E) 177H(Q) 180E(Q) 181Q(E) 216P 217D(N) 218M(E) 219S(Q) 227R(Q) 228N(E) 263D(P) 264D(N) 265P(E) 266E(Q) 269A(Q) 270D(E) 305S(P) 306E(N) 307L(E) 308P(Q) 311T(Q) 312P(E) 347P 348K(N) 349T(E) 350N(Q) 353K(Q) 354E 390D(N) 392K (identity: 15.6 %/42.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfg_B_1 identity=42.1%

queryA       144:LTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCR--NKN: 241
                :*  ****  **  ** * ** **   ** **   *   * *** ***  *      **  **   *  **  *         *    * ***     *  :
5mfg_B_1      28:LSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-----ILQEALWALSNIASGGNEQ: 122
SecStr          :HHHHHHTTHHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT S HH-----HHHHHHHHHHHHTTS HHH:    
ExpBur          :eeeeeeeeeeeebeebeeeebeebeeebebeeeeebeebbeebbebbebbeebbbbbbeeebbebbeebbebeeee-----bbebbbebbbbbbebbeeb:    
Contact         :                              bbbb  bb                                  bbbb       bb               

queryA       242:PAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFP: 341
                :    ***    ** ** **       *    ** *    * ** *  *   *  * ** **      *   ** *  **  *  ** * *******    :
5mfg_B_1     123:IQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALV: 220
SecStr          :HHHHHHTT-- HHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHH:    
ExpBur          :bebbbeee--bbeebeebbebeeeebbebbbebbbbbbebbeebbbbbbeeebbebbeebbebeeeebbebbbebbbbbbebbeebbebbbeeebbebbb:    
Contact         :                     bbbb  bb                                  bbbb  bb                             

queryA       342:SLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEA: 397
                : **  *   *  ** *  ***  *   * * *   *    *    *    * ****:
5mfg_B_1     221:QLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEA: 276
SecStr          :HHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHH:    
ExpBur          :ebbebeeeebbebbbebbbebbebbeebbebbeeeebeebbeebeebeeeebeebb:    
Contact         :     bbbb  bb                                   b b

Protein Model on 5mfg_B_1_D_1 (TEMPLATE: 5mfg )

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