[pdbjlvh2]Protein Model on 5mfg_B_1_A

Protein Model on 5mfg_B_1_A_1 (TEMPLATE: 5mfg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [269 aa]	YIIIM5AII
2	b		A 1 (A)	polymer(polypeptide(L)) [282 aa]	YIIIM5AII	144L 147I 148A 150G 151T(G) 153E 154Q 155T(I) 157A 158V 161G(A) 162G 166A 167F(L) 178I 180E(Q) 181Q(E) 184W 185A 188N 189I 191G(S) 231W 269A(Q) 273W 315R(W) (identity: 65.4 %/42.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfg_B_1 identity=42.1%

queryA       144:LTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCR--NKN: 241
                :*  ****  **  ** * ** **   ** **   *   * *** ***  *      **  **   *  **  *         *    * ***     *  :
5mfg_B_1      28:LSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-----ILQEALWALSNIASGGNEQ: 122
SecStr          :HHHHHHTTHHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT S HH-----HHHHHHHHHHHHTTS HHH:    
ExpBur          :eeeeeeeeeeeebeebeeeebeebeeebebeeeeebeebbeebbebbebbeebbbbbbeeebbebbeebbebeeee-----bbebbbebbbbbbebbeeb:    
Contact         :b  bb bb bbb bb  bb   bb          b bb  bb  bb b                                       b            

queryA       242:PAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFP: 341
                :    ***    ** ** **       *    ** *    * ** *  *   *  * ** **      *   ** *  **  *  ** * *******    :
5mfg_B_1     123:IQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALV: 220
SecStr          :HHHHHHTT-- HHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHH:    
ExpBur          :bebbbeee--bbeebeebbebeeeebbebbbebbbbbbebbeebbbbbbeeebbebbeebbebeeeebbebbbebbbbbbebbeebbebbbeeebbebbb:    
Contact         :                           b   b                                         b                          

queryA       342:SLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEA: 397
                : **  *   *  ** *  ***  *   * * *   *    *    *    * ****:
5mfg_B_1     221:QLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEA: 276
SecStr          :HHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHH:    
ExpBur          :ebbebeeeebbebbbebbbebbebbeebbebbeeeebeebbeebeebeeeebeebb:

Protein Model on 5mfg_B_1_A_1 (TEMPLATE: 5mfg )

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