[pdbjlvh2]Protein Model on 4bpl_A

Protein Model on 4bpl_A_1 (TEMPLATE: 4bpl )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IMA1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [422 aa]	IMPORTIN SUBUNIT ALPHA-1A :IMA1A_ORYSJ

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4bpl_A_1 identity=52.3%

queryA        77:SVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHA: 176
                :*      *  *     ** **   ***** *  ***   *  *  * ** ** * *    *** ************* ** * * ** * *  ** *   :
4bpl_A_1       1:SLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSD: 100
SecStr          : HHHHHHHHTSS HHHHHHHHHHHHHHHSSSSS  HHHHHHTT HHHHHHHHS TT HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S H:    
ExpBur          :eeeebeebbebeeeeebbebbbebbeebeeeeeeebeebbebebbebbbebbeeeebeebbebbbebbbbbbeeeeebbeebeeeebbeebbebbebebe:    

queryA       177:HISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS: 276
                :   ********* ***    ****   **  **** *      *     *** ****** ** * * *        ** * ** *  * *** * *** *:
4bpl_A_1     101:DVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSM----LRNATWTLSNFCRGK-PQPSFEQTRPALPALARLIHSNDEEVLTDACWALS: 195
SecStr          :HHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHT STT  HHH----HHHHHHHHHHHH SS-S   HHHHTTHHHHHHHHTT   HHHHHHHHHHHH:    
ExpBur          :ebebbbbebbbbbbeeeeebbeebbeeebbeebbebbeeebeeeb----eebbbebbbbbbeee-eebebeebeebbebbbebbeeeeeebbbbbbebbb:    

queryA       277:YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVN: 375
                :** ** *  *  *   ** * ** **         ****  ****** * ***  **  **    **** * *  * *** ** ******  **** * *:
4bpl_A_1     196:YLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVIN: 295
SecStr          :HHTSS HHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHTTTHHHHHHHHHHSS  HHHHHHHHHHHHHHHTS HHHHHHHHH:    
ExpBur          :ebbeeeeebbebbbeeebbebbbebbebebeebbebbbebbbbbbebeeebbeebbeeebbebbbebbeeeeeeebbebbbbbbbebbebeeebbeebbe:    

queryA       376:HGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEK---------LSIMIEE: 466
                : *    **  *  * *   *** **  * ****   ** ***  * * **  **   *  *  * *    **     * *** *          * ** *:
4bpl_A_1     296:AGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENIL----KVGETDKTLAAGDVNVFSQMIDE: 391
SecStr          :HT HHHHHHHHHHS HHHHHHHHHHHHHHHHH  HHHHHHHHHTT HHHHHHTTT S HHHHHHHHHHHHHHH----HHHHHHHHHHT SS HHHHHHHH:    
ExpBur          :eebbeebbebbeebeeebeebbbebbbbbbeebeeebbeebbeeebbebbbebbebeeeebbebbbebbbbbb----ebbeeeeeeeeeeebebbeebee:    

queryA       467:CGGLDKIEALQNHENESVYKASLSLIEKYF: 496
                :  ** *** ** * *   *       * * :
4bpl_A_1     392:AEGLEKIENLQSHDNNEIYEKAVKILEAYW: 421
SecStr          :TTHHHHHHHGGG S HHHHHHHHHHHHHH :    
ExpBur          :bebbebbeebeeeeeeebeebbbebbeebe:

Protein Model on 4bpl_A_1 (TEMPLATE: 4bpl )

Input Residue Numbers for Focused Sites