[pdbjlvh2]Protein Model on 3tj3_C

Protein Model on 3tj3_C_1 (TEMPLATE: 3tj3 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IMA1_HUMAN)	C 1 (B)	polymer(polypeptide(L)) [426 aa]	Importin subunit alpha-1 :IMA1_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3tj3_C_1 identity=50.7%

queryA        80:DIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRA-GLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHI: 178
                :*    * *   * ** ***  ***** *  ****  *   *    ** ** *      ****** ******* * **  *   ** * ** ** *     :
3tj3_C_1      21:DMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDV: 120
SecStr          :HHHHHHHSS HHHHHHHHHHHHHHHT SS   HHHHHHSTTHHHHHHHHTT TT HHHHHHHHHHHHHHHTT HHHHHHHHHHTHHHHHHHHTTSS HHH:    
ExpBur          :ebeebbeeeeeeebeebbeebbeebeeeeeebbeebeeeeebbeebbebbeeeeeeebbebbbebbbbbbeeeeebbeebbeeebbebbbebbebeeeeb:    

queryA       179:SEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYL: 278
                : *************    ** *       *** *              **  * ****** * * *    *   *  *  **   *  **** *** ***:
3tj3_C_1     121:QEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMT----RNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL: 216
SecStr          :HHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHTS   HHHH----HHHHHHHHHHH  SSS   HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHH:    
ExpBur          :bbbbbebbbebbeeebebbeebbeeebbeebbebbeeebeeebb----ebbbebbbbbbeeeeeebebeebeebbebbbebbeeebeebbbbbbebbbeb:    

queryA       279:TDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL: 378
                : ****  *  *   **   ** **       * ***** ****** * ****     **     **  **  * *** ** ******   *** *     :
3tj3_C_1     217:SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANI: 316
SecStr          :TSS HHHHHHHHHTS HHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHTTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTT :    
ExpBur          :beeeeebbeebbeeebbeebbebbeeeeeebbebbbebbbbbbebeeebbeebbeeebbebbeebbebeeeebbebbbebbbebbebeeebbeebbeeeb:    

queryA       379:VPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473
                : * * * *  * * * *** ** ** ****  *** ***  * * **  ***  * **  * *    **    *         *      ***  *****:
3tj3_C_1     317:FPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKI: 416
SecStr          :HHHHHHHTTSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHTTTT S HHHHHHHHHHHHHHHHHHHHHHHTTT  S HHHHHHHTTTHHHHH:    
ExpBur          :bebbbebbeebeeebebebbebbbbbbeebbeebbeebbeeebbebbbebbeeeeeebbebbbebbbbbbebbeebbeeeeeeebebbeebeebebbebb:    

queryA       474:EALQNHENESVYKASLSLIEKYFSVE: 499
                :* ** ***   *     *** **  *:
3tj3_C_1     417:EFLQSHENQEIYQKAFDLIEHYFGTE: 442
SecStr          :HHGGG SSHHHHHHHHHHHHHHT   :    
ExpBur          :eebeeeebeebeeebeebbeebeeee:

Protein Model on 3tj3_C_1 (TEMPLATE: 3tj3 )

Input Residue Numbers for Focused Sites