Protein Model on 1th1_A_1_C_1
(TEMPLATE: 
1th1
)Protein Model on 1th1_A_1_C_1
(TEMPLATE: 1th1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [514 aa] | Beta-catenin :CTNB1_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [56 aa] | Adenomatous polyposis coli protein :APC_HUMAN | 132D(N) 134S(K) 135P(F) 137Q(A) 138F(I) 141A(D) 149S(Y) 150G 155T(K) 179S(Y) 181Q(K) 184W 191G(K) 192D(V) 195V 219S(R) 231W 234S(R) 235N 241N(D) 244P(T) 276S 277Y(N) 279T 280D(C) 281G(N) 286I(K) 312P 318G(R) 319N(H) 322T(S) 323G(R) 361N(K) 368D(R) 369Q(N) (identity: 22.9 %/27.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1th1_A_1 identity=27.4% |
queryA 118:AGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVF---RDLVIKYGAVDPLLALLA: 214
:** * * * * * * * * * * * * ** * * * :
1th1_A_1 144:AGGLQKMVALLNKTNVKFLAITTD-CLQILAYGNQESKLIILASGGPQALVNIMRT---YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLT: 239
SecStr :TTHHHHHHHGGG HHHHHHHHH-HHHHHHTT HHHHHHHHHTTHHHHHHHHHTT--- HHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTT:
ExpBur :eebbeebbebbeeeeeebbbebbb-bbbbbbeebeebbeebeeeebbebbbebbee---eeeeebbebbbebbebbbebeebbeebbebbbbebbbebbe:
Contact : b bb bb b bb b b b b bb b
queryA 215:VPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVK--LLGASELPIVTP: 312
: * * *** ** * * * *** ** ** * * ** ** * ** * * *:
1th1_A_1 240:DPSQR-----LVQNCLWTLRNL---SDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEP: 331
SecStr : S HH-----HHHHHHHHHHHH---GGG TT HHHHHHHHHHTT S HHHHHHHHHHHHHHTSS HHHHHHHHHTTHHHHHHHHHHHHTT HHHHHH:
ExpBur :eeeee-----bbbbbbebbeeb---beebeebeebeebbeebbebbeeeeeebbbbbbbbbbebbeebeebbeebbeeebbebbbebbeebeeebebbeb:
Contact : b b bb b b bb bbb b b
queryA 313:ALRAIGNIVTGTDE----QTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQV-VNH------GLVPFLVSVLSKADFKTQKEA--VW: 399
:* * * * * * * * ** * * * * ** * * ** * * ** :
1th1_A_1 332:AICALRHLTSRHQEAEMAQNAVRLHYG-LPVVVKLLHPP-------SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSXXX: 423
SecStr :HHHHHHHHTSSSTTHHHHHHHHHHTT -HHHHHHTTSTT------- HHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHHHHHHHT ---:
ExpBur :bbbbbebbbeebeebeebbebbeeeeb-bebbbebbeee-------beeebbebbbbbbebbbebeebbeebeeeebbebbbebbeebbeebeeeee---:
Contact : bb bb b bb
queryA 400:AVTNYTSGGTVEQIV: 414
: * * **:
1th1_A_1 424:XXXQFVEGVRMEEIV: 438
SecStr :--- EETTEEHHHHH:
ExpBur :---eeeeebebebbb:
|
[assembly_id:1]
[help]