#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5rmf_A_1_C_1

Protein Model on 5rmf_A_1_C_1 (TEMPLATE: 5rmf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [572 aa] Helicase :R1AB_SARS2
2 b C 1 (A) non-polymer(NX7) (2,6-difluorophenyl)(pyrrolidin-1-yl)methanone 281Q 434P 437F 457Y 460K (identity: 100.0 %/96.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5rmf_A_1 identity=96.6%
queryA         1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
                :**********************************************************************************************      :
5rmf_A_1       1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKXXXXXX: 100
SecStr          :  EE TTT  EES EESSSSS  B  HHHHHHHHTTSS   EESSSB    STT     GGGEEEETTEEEETTT  SS EESEETTEE  S  ------:    
ExpBur          :eebebbbeeeebbbbbbebeeebebbbebbeebbeebebeebbbeeebebebeebeeeebeebebbeebbebeeeeeeebeebbeeeebebeee------:    

queryA       101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
                :  ***********************************************************************************        *******:
5rmf_A_1     101:XXVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYXXXXXXXXQIGEYTF: 200
SecStr          :-- HHHHHHHH  S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHHTTS  EEEEE  SSS BEEEE TTS     SSSS EEE --------  EEEEE:    
ExpBur          :--eeebbebbebebbebebbebbbebeeebbbbbbbbbebbbbeeeeebbebebeeeeeeeebebeeeeeeeebeebeebebbbe--------ebbebeb:    

queryA       201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
                :**    **********************************************************************************************:
5rmf_A_1     201:EKXXXXDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
SecStr          :E ----  BEEEESS     TT EEE          S SS    B SS  S    S   GGGGGGHHHHHHHHTBSEEEEE  TTSSHHHHHHHHHHHST:    
ExpBur          :ee----eebebeeeeeeebeeeeebebeeeebeebebebbbeeeeeeeeeebeeeeebeeebeebeeebeebbebebbbbbbbbebebebbbbbbbebbe:    
Contact         :                                                                                b                   

queryA       301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
                :****************************************************************************************************:
5rmf_A_1     301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
SecStr          :T  EEEEESSHHHHHHHHHHHHHHS GGGEEE   SS  S    SSEES TTSSEEEEEGGG  SEEEEEEEE  GGG  HHHHHHHHHHEEEEEEEEEE:    
ExpBur          :ebbbbbbbbebebbbebbeebeeebeeeebbbbbeeeeeeebbeebeeeeeeebbbbbbbebbeebebebbbbbbbbebebbbbbbbbeebebebbbbbb:    

queryA       401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
                :****************************************************************************************************:
5rmf_A_1     401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
SecStr          : TTS     TT  BS   GGGS HHHHHHHHT  SEE  EESSS HHHHHHHHHHHSTT  EESS   S EEEEE     EEETTEEE HHHHHHHHHHH:    
ExpBur          :bbbbbebebebbeeeebebebbbbbbeebeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeeebbbeebbbbbeebb:    
Contact         :                                 b  b                   b  b                                        

queryA       501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592
                :********************************************************************************************:
5rmf_A_1     501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592
SecStr          :HH GGGGG EEEES HHHHHHHHHHH   EEEHHHHTT  EEEEEEE    STTTS HHHHHHHHTTEEEEEEEEES HHHHHH  SEE   :    
ExpBur          :eeeeebeebbbbbbbebbbebbeeebebeeebbeebbeeebebbbbbbbbeeeebeeebbbbbbbbbbeebbbbbbbbeebbeebebeeeee:    


Input Residue Numbers for Focused Sites

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