[pdbjlvh2]Protein Model on 6ts5_A_1_B

Protein Model on 6ts5_A_1_B_1 (TEMPLATE: 6ts5 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [236 aa]	Coagulation factor XI :FA11_HUMAN
2	b		B 1 (A)	non-polymer(NW2)	2-[2-[3-[(3~{S})-3-azanyl-2,3-dihydro-1-benzofuran-5-yl]-5-propan-2-yl-phenyl]ethoxy]-3-methoxy-benzoic acid	281C 296H 297C 300K(Y) 386A(Y) 389E(L) 435D 436S(A) 437C 438Q(K) 439G 441S 459T 461W 462G 464G 465C 472G (identity: 72.2 %/43.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6ts5_A_1 identity=43.9%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFM-----FYGAGYQVEKVISHPNYDSKTKNNDIA: 347
                :****     * ***** **       * ******   ** *****       *       *** **       * *    *   * *  *       ***:
6ts5_A_1       1:IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCF-YGVESPKILRVYSGILNQSEIKEDTSFFG----VQEIIIHDQYKMAESGYDIA:  95
SecStr          : BS EE  TTSSTTEEEEEE SSS EEEEEEEEEETTEEEE GGGG-TT   GGGEEEE S SBGGG  TT   EE----EEEEEE TT S GGGS   E:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeeebbbbbbbbeeebbbbbbebb-eeeeeeebbebbbebbbbeebeeeeeebe----beeebebeeeeebeebebbb:    
Contact         :                            b              bb  b                                                    

queryA       348:LMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                :* **       *   *  **  *        **  ***      *    *  **  *     *  **     **  *****   *  * * *******  :
6ts5_A_1      96:LLKLETTVNYTDSQRPISLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY-RGHKITHKMICAGYREGGKDACKGDSGGPLSC: 194
SecStr          :EEEESS    BTTB   B S TT TT     EEEEES  SSTT    SB EEEE  EE HHHHHHH -TTS   TTEEEE  TT   B  TTTTTSEEEE:    
ExpBur          :bbebeeebeeeeebeebebbeeeeeeeebebbebbbbbeeeeebeebeebbbbebeebebeebeebb-eeeebeeebbbbbeeebeebbbebbbbbbbbb:    
Contact         :                                      b  b                                             bbbbb b      

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :  *  * * * **** ***   ***** **    ***     :
6ts5_A_1     195:KHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ: 236
SecStr          :EETTEEEEEEEEEE SSSS TT  EEEEEGGGGHHHHHHHH :    
ExpBur          :eeeeebbbbbbbbbeeebbeeeebbbbbbbeebbebbeeeee:    
Contact         :           b bb bb      b

Protein Model on 6ts5_A_1_B_1 (TEMPLATE: 6ts5 )

Input Residue Numbers for Focused Sites