Protein Model on 6r8x_A_1_C_1 (TEMPLATE: 6r8x )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [228 aa] Coagulation factor XI :FA11_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [219 aa] anti-Factor-XI Fab fragment heavy chain MAA868 296H 300K(Y) 340K(A) 341T(E) 386A(Y) 387T(R) 388E(K) 389E(L) 390K(R) 441S 460S 461W 462G 463S(E) 470R (identity: 40.0 %/42.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6r8x_A_1 identity=42.2%
queryA       261:SALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFM-----FYGAGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352
                :    * ***** **       * ******   ** *****       *       *** **       * *    *   * *  *       **** ** :
6r8x_A_1       6:ASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCF-YGVESPKILRVYSGILNQSEIKEDTSFFG----VQEIIIHDQYKMAESGYDIALLKLE: 100
SecStr          :B  TTSSTTEEEEEE SSS EEEEEEEEEETTEEEE GGGG-TT   GGGEEEE S SBGGG  TT   B ----EEEEEE TT S GGGS   EEEEES:    
ExpBur          :ebeeeebbbbbbbbbeeeeeebbbbbbbbbebbbbbbbbbb-eebeeeebbebbbebbebeebeeebeebb----beeebebeeeeebeebebbbbbebe:    
Contact         :                                      b   b                                            bb           

queryA       353:KPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNI: 452
                :      *   *  **  *        **  ***      *    *  **  *     *  **     **  *****        * *******    *  :
6r8x_A_1     101:TTVNYTDSQRPISLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY-RGHKITHKMICAGYREXXXXACKGDSGGPLSCKHNEV: 199
SecStr          :S     SSS   B   GGGSS   SSEEEEES   STT    SB EEEE  EE HHHHHHHT-TTS   TTEEEE  B ----     TT EEEEEETTE:    
ExpBur          :eebeeeeebeebebbeeeeeeeebeebebbbbbbeeeeeeeeeebbebebebbeeeebeeeb-eeeebeeebbbbbbee----eeebbbbbbbbbeeeee:    
Contact         :                                 bbbbb                                                  b           

queryA       453:WWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :* * * **** ***   ***** **    ***     :
6r8x_A_1     200:WHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ: 236
SecStr          :EEEEEEEEEESBSBTTS BEEEEEGGGGHHHHHHHT :    
ExpBur          :bbbbbbbbbbebbeeeeebbbbbbbbebbebbeeeee:    
Contact         :       bbbb      b                                                                                  


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