Protein Model on 5pb1_B_1_M_1 (TEMPLATE: 5pb1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) B 1 (D) polymer(polypeptide(L)) [250 aa] Coagulation factor VII heavy chain :FA7_HUMAN
2 b M 1 (D) non-polymer(BEN) BENZAMIDINE 435D 436S 437C 438Q(K) 441S 459T(V) 460S 461W 462G 464G 465C 472G (identity: 83.3 %/39.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5pb1_B_1 identity=39.2%
queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****     *  **** * *     ***  *   * * ****  *  *    *      *         *      *  **    *   * * ****  *:
5pb1_B_1       1:IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKN----WRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRL:  96
SecStr          : BS EE  TTSSTTEEEEEETTEEEEEEEEEETTEEEE GGGGTT S ----GGGEEEEES  BTT   S  EEEEEEEEEEETT  TTS TT  EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeebbbbbbeeebbbbbbebbeebee----beebebbbbbbbeeeeeeebbebebebbbbbeebeeeeeebbbbbbbb:    

queryA       352:QKPLTFNDLVKPVCLPNPGM---MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRYVYDNL-ITPAMICAGFLQGNVDSCQGDSGGPL: 445
                :  *    * * * ***        *        ****     * *   *    *    ** *   **       **  * ***   *  *** ****** :
5pb1_B_1      97:HQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELUVLNVPRLMTQDCLQQSRXXXXSPNITEYMFCAGYSDGSKDSCKGDSGGPH: 196
SecStr          :SS    BTTB   B   HHHHHHTGGG  EEEEEES BSSTT  B SB EEEEEEEE HHHHHHH  ----     TTEEEES SSSS B  TT TT EE:    
ExpBur          :eeebeeeeebeebebbeeeebeeebbeeeebebbbbbbeeeeeeebeebebbebbbbebeebeeeee----eeebeebbbbbbeeeeeebbbeebbbbbb:    
Contact         :                                                                                         bbbb  b    

queryA       446:VTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                : *     * * *  *** ***     ***  *     *    **  :
5pb1_B_1     197:ATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE: 242
SecStr          :EEEETTEEEEEEEEEE STTT TT  EEEEEGGGGHHHHHHHHTS :    
ExpBur          :bbeeeeeebbbbbbbeeeebbeebebbbbbebbebbebbeebeeee:    
Contact         :             bbbb bb      b                                                                         


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