Protein Model on 5pam_B_1_J_1 (TEMPLATE: 5pam )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) B 1 (B) polymer(polypeptide(L)) [250 aa] Coagulation factor VII heavy chain :FA7_HUMAN
2 b J 1 (B) non-polymer(7Z1) (2~{R})-2-[(1-azanylisoquinolin-6-yl)amino]-2-(5-ethoxy-2-fluoranyl-phenyl)-1-[(2~{R})-2-phenylpyrrolidin-1-yl]ethanone 296H 299E(D) 300K 341T 342K(T) 345D 435D 436S 438Q(K) 441S 459T(V) 460S 461W 462G 463S(Q) 464G 465C 472G (identity: 72.2 %/39.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5pam_B_1 identity=39.2%
queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****     *  **** * *     ***  *   * * ****  *  *    *      *         *      *  **    *   * * ****  *:
5pam_B_1       1:IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKN----WRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRL:  96
SecStr          : BS EE  TTSSTTEEEEEETTEEEEEEEE SSSEEEE GGGGTT S ----GGGEEEEES  BTT   S  EEEEEEEEEEETT  TTS TT  EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeeebbbbbbeeebbbbbbebbeebee----beebebbbbbbbeeeeeeebbebebebbbbbeebeeeeeebbbbbbbb:    
Contact         :                                        b  bb                                            bb  b      

queryA       352:QKPLTFNDLVKPVCLPNPGM---MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRYVYDNL-ITPAMICAGFLQGNVDSCQGDSGGPL: 445
                :  *    * * * ***        *        ****     * *   *    *    ** *   **       **  * ***   *  *** ****** :
5pam_B_1      97:HQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRXXXXSPNITEYMFCAGYSDGSKDSCKGDSGGPH: 196
SecStr          :SS    BTTB   B   HHHHHHTGGG  EEEEEES BSSTTS B SB EEEEEEEE HHHHHHH  ----     TTEEEES SSSS B  GGGTT EE:    
ExpBur          :eeebeeeeebeebebbeeeebeeebbeeeebebbbbbbeeeeeeebeebbbbebbbbebeebeeeee----eeebeebbbbbbeeeeeebbbeebbbbbb:    
Contact         :                                                                                         bb b  b    

queryA       446:VTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                : *     * * *  *** ***     ***  *     *    **  :
5pam_B_1     197:ATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE: 242
SecStr          :EEEETTEEEEEEEEEE STTT TT  EEEEEGGGGHHHHHHHHTS :    
ExpBur          :bbeeeeeebbbbbbbbeeebbeebebbbbbebbbbbebbeebeeee:    
Contact         :             bbbbbbb      b                                                                         


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