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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | B 1 (C) | polymer(polypeptide(L)) [250 aa] | Coagulation factor VII heavy chain :FA7_HUMAN | |
2 | b | F 1 (C) | non-polymer(7YP) | (2~{S})-~{N}-[[4-(aminomethyl)-2-(2-azanyl-2-oxidanylidene-ethoxy)phenyl]methyl]-2-(4-hydroxyphenyl)-2-methoxy-ethanami de | 296H 340K(G) 341T 342K(T) 345D 419L(P) 435D 436S 437C 441S 459T(V) 460S 461W 462G 464G 472G (identity: 75.0 %/39.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5pak_B_1 identity=39.2% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDSKTKNNDIALMKL: 351 :**** * **** * * *** * * * **** * * * * * * ** * * * **** *: 5pak_B_1 1:IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKN----WRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRL: 96 SecStr : BS EE TTSSTTEEEEEETTEEEEEEEE SSSEEEE GGGGTT S ----GGGEEEEES BTT S EEEEEEEEEEETT TTS TT EEEEE: ExpBur :bbeeeebeeeebbbbbbbbeeeeeebbbbbbeeebbbbbbebbeebee----eeebebbbbbbbeeeeeeebbebebebbbbbeebeeeeeebbbbbbbb: Contact : b bbb b queryA 352:QKPLTFNDLVKPVCLPNPGM---MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRYVYDNL-ITPAMICAGFLQGNVDSCQGDSGGPL: 445 : * * * * *** * **** * * * * ** * ** ** * *** * *** ****** : 5pak_B_1 97:HQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRXXXXSPNITEYMFCAGYSDGSKDSCKGDSGGPH: 196 SecStr :SS BTTB B HHHHHHTGGG EEEEEES BSSTTS B SB EEEEEEEE HHHHHHH ---- TTEEEES SSSS B GGGTT EE: ExpBur :eeebeeeeebeebebbeeeebeeebbeeeebebbbbbbeeeeeeebeebbbbebbbbebeebeeeee----eeebeebbbbbbeeeeeebbbebbbbbbb: Contact : b bbb b queryA 446:VTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 : * * * * *** *** *** * * ** : 5pak_B_1 197:ATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE: 242 SecStr :EEEETTEEEEEEEEEE SSSS TT EEEEEGGGGHHHHHHHHTS : ExpBur :bbeeeeeebbbbbbbbeeebbeebebbbbbebbebbebbeebbeee: Contact : bbbb b b |