[pdbjlvh2]Protein Model on 5paj_B_1_D

Protein Model on 5paj_B_1_D_1 (TEMPLATE: 5paj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [250 aa]	Coagulation factor VII heavy chain :FA7_HUMAN
2	b		D 1 (B)	non-polymer(7XJ)	1-(1-azanylisoquinolin-6-yl)-3-(phenylmethyl)urea	296H 341T 435D 436S 438Q(K) 441S 459T(V) 460S 461W 462G 464G 465C 472G (identity: 84.6 %/39.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5paj_B_1 identity=39.2%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****     *  **** * *     ***  *   * * ****  *  *    *      *         *      *  **    *   * * ****  *:
5paj_B_1       1:IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKN----WRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRL:  96
SecStr          : BS EE  TTSSTTEEEEEETTEEEEEEEE SSSEEEE GGGGTT S ----GGGEEEEES  BTT   S  EEEEEEEEEEETT  TTS TT  EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeebbbbbbeeebbbbbbebbeebee----eeebebbbbbbbeeeeeeebbebebebbbbbeebeeeeeebbbbbbbb:    
Contact         :                                        b                                                b          

queryA       352:QKPLTFNDLVKPVCLPNPGM---MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRYVYDNL-ITPAMICAGFLQGNVDSCQGDSGGPL: 445
                :  *    * * * ***        *        ****     * *   *    *    ** *   **       **  * ***   *  *** ****** :
5paj_B_1      97:HQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRXXXXSPNITEYMFCAGYSDGSKDSCKGDSGGPH: 196
SecStr          :SS    BTTB   B   HHHHHHTGGG  EEEEEES BSSTT  B SB EEEEEEEE HHHHHHH  ----     TTEEEES SSSS B  GGGTT EE:    
ExpBur          :eeebeeeeebeebebbeeeebeeebeeeeebebbbbbbeeeeeeebeebbbbebbbbebeebeeeee----eeebeebbbbbbeeeeeebbbeebbbbbb:    
Contact         :                                                                                         bb b  b    

queryA       446:VTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                : *     * * *  *** ***     ***  *     *    **  :
5paj_B_1     197:ATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE: 242
SecStr          :EEEETTEEEEEEEEEE STTT TT  EEEEEGGGGHHHHHHHHTS :    
ExpBur          :bbeeeeeebbbbbbbbeeebbeebebbbbbebbebbebbeebeeee:    
Contact         :             bbbb bb      b

Protein Model on 5paj_B_1_D_1 (TEMPLATE: 5paj )

Input Residue Numbers for Focused Sites