Protein Model on 5jb8_B_1_D_1 (TEMPLATE: 5jb8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) B 1 (S) polymer(polypeptide(L)) [235 aa] Coagulation factor IX :FA9_HUMAN
2 b D 1 (S) non-polymer(0GJ) L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide 296H 342K(Y) 435D 436S 437C 438Q 439G 440D 441S 460S 461W 462G 464G(E) 465C 472G (identity: 86.7 %/40.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5jb8_B_1 identity=40.4%
queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILR-QSFMFYGAGYQVEKVISHPNYDS--KTKNNDIALMKLQ: 352
                : **** * **  **** *       *****    **********         *  **               *   * * **     * * ****  * :
5jb8_B_1       1:VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVK----ITVVAGEHNIEETEHTEQKRNVIRIIPHHNYNAAINTYNHDIALLELD:  96
SecStr          : BS EE  TTSSTTEEEEESSSTT EEEEEEETTEEEE GGGSSS   ---- EEEES SBTTS  S  EEEEEEEEEE TTTTSSTT  TT  EEEEES:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeebbbbbbbbbebbbbbbbebbeeeee----bbbbbbbbbeeeeeeeebeeebeeebebeebeeeeeeebbbbbbbbbe:    
Contact         :                                        b                                                b          

queryA       353:KPLTFNDLVKPVCLPNPGM--MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRY-VYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                : **  *  * * *                  ****    **    **    * *     *        * *     * ****  *  ********** **:
5jb8_B_1      97:EPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIYNN-----MFCAGFHEGGRDSCQGDSGGPHVT: 191
SecStr          :S    BTTB   B   HHHHHHHHHT EEEEEESSBSSTTS B SB EEEEEEEE HHHHHHT SS   TT-----EEEES TT S B  TT TT EEEE:    
ExpBur          :eebeeeeebeebebbeeeebeebbeeeebbbbbbbebeeeeeebeebbbbebeebeeeebeebbeeebeeb-----bbbbbbeebeebbbebbbbbbbbb:    
Contact         :                                                                                       bbbbbbb      

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :       * *  ***  **     * *  *     **     :
5jb8_B_1     192:EVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTK: 233
SecStr          :EETTEEEEEEEEEE SSSS TT  EEEEEGGGGHHHHHHHT :    
ExpBur          :eeeeebbbbbbbbbeeebbeeeebbbbbbbbebbebbeeebe:    
Contact         :            bbb bb      b                                                                           


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