[pdbjlvh2]Protein Model on 4ty7_A_1_K

Protein Model on 4ty7_A_1_K_1 (TEMPLATE: 4ty7 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [238 aa]	Coagulation factor XI :FA11_HUMAN
2	b		K 1 (A)	non-polymer(EDO)	1,2-ETHANEDIOL	342K(S) 343N(G) 344N(Y) 421T 423A(K) 480F(Y) (identity: 16.7 %/44.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4ty7_A_1 identity=44.5%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFM-----FYGAGYQVEKVISHPNYDSKTKNNDIA: 347
                :****     * ***** **       * ******   ** *****       *       *** **       * *    *   * *  *       ***:
4ty7_A_1       1:IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCF-YGVESPKILRVYSGILNQSEIKEDTSFFG----VQEIIIHDQYKMAESGYDIA:  95
SecStr          : BS EE  TTSSTTEEEEEE SSS EEEEEEEEEETTEEEE GGGG-TT   GGGEEEE S SBGGG  TTS  EE----EEEEEE TT S GGGS   E:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeeebebbbbbbbeebbbbbbebb-eebeeeebbebbbebbbbeebeeebeebb----beeebebeeeeebeebebbb:    
Contact         :                                                                                              bbb   

queryA       348:LMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                :* **       *   * ***  *        **  ***      *    *  **  *     *  **     **  *****   *  * * *******  :
4ty7_A_1      96:LLKLETTVGYGDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY-RGHKITHKMICAGYREGGKDACKGDSGGPLSC: 194
SecStr          :EEEESS    BTTB   B   SGGGG     EEEEES  SSSS    SB EEEE  EE HHHHHHHS-TTS   TTEEEE  TT   B  TT TT EEEE:    
ExpBur          :bbebeeebeeeeebeebeebeeeeeeeebeebebbbbbeeeeeeeebeebbbbebeeeeeeebeebb-eeeebeeebbbbbeeebeebbbeebbbbbbbb:    
Contact         :                                                                         b b                        

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490
                :  *  * * * **** ***   ***** **    ***     *:
4ty7_A_1     195:KHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQA: 237
SecStr          :EETTEEEEEEEEEE SSSS TT  EEEEEGGGGHHHHHHHHS :    
ExpBur          :eeeeeebbbbbbbbeeebbeeeebbbbbbbbebbebbeeebee:    
Contact         :                                b

Protein Model on 4ty7_A_1_K_1 (TEMPLATE: 4ty7 )

Input Residue Numbers for Focused Sites