Protein Model on 2zzu_B_1_N_1 (TEMPLATE: 2zzu )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) B 1 (H) polymer(polypeptide(L)) [254 aa] Factor VII heavy chain :FA7_HUMAN
2 b N 1 (H) non-polymer(359) 3-[[3-[(2R)-3-[[(2S)-5-amino-1-[(4-carbamimidoylphenyl)methylamino]-1,5-dioxo-pentan-2-yl]amino]-2-(ethylsulfonylamino)-3-oxo-propyl]-1H-indol-5-yl]oxymethyl]benzoic acid 296H 299E(D) 337Y 340K(G) 341T 342K(T) 417D 418N(S) 419L(P) 435D 436S 437C 438Q(K) 441S 459T(V) 460S 461W 462G 463S(Q) 464G 465C 472G (identity: 63.6 %/40.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2zzu_B_1 identity=40.1%
queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****     *  **** * *     ***  *   * * ****  *  *    *      *         *      *  **    *   * * ****  *:
2zzu_B_1       1:IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKN----WRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRL:  96
SecStr          : BS EE  TTSSTTEEEEEETTEEEEEEEESSSSEEEE GGGGTT   ----GGGEEEEES  BTT   TT EEEEEEEEEEETT  TTS TT  EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeebbbbbbeeebbbbbbebbeebee----eeebebbbbbbbeeeeeeebbeeebebbbbbeebeeeebebbbbbbbb:    
Contact         :                                        b  b                                         b  bbb         

queryA       352:QKPLTFNDLVKPVCLPNPGM---MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRYVYDNL-ITPAMICAGFLQGNVDSCQGDSGGPL: 445
                :  *    * * * ***        *        ****     * *   *    *    ** *   ** * *   **  * ***   *  *** ****** :
2zzu_B_1      97:HQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPH: 196
SecStr          :SS    BTTB   B   HHHHHHTGGG SEEEEEES BSSTT  B SB EEEEEEEE HHHHHHHS   SS     TTEEEES SSSS B  GGGTT EE:    
ExpBur          :eeebeeeeebeebeebeeeebeeebbeeeebebbbbbbeeeeeeebeebbbbebbbbebeebeeebeeeeeeeeebebbbbbbeeeeeebbbebbbbbbb:    
Contact         :                                                                      bbb                bbbb  b    

queryA       446:VTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                : *     * * *  *** ***     ***  *     *    **  :
2zzu_B_1     197:ATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE: 242
SecStr          :EEEETTEEEEEEEEEE STTT TT  EEEEEGGGSHHHHHHHTTS :    
ExpBur          :bbeeeeeeebbbbbbeeeebbeebbbbbbbebbbbbebbeebeeee:    
Contact         :             bbbbbbb      b                                                                         


Input Residue Numbers for Focused Sites

ex) 2,15,123