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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | C 1 (A) | polymer(polypeptide(L)) [239 aa] | Hepatocyte growth factor activator :HGFA_HUMAN | |
2 | b | B 1 (H) | polymer(polypeptide(L)) [220 aa] | antibody heavy chain, Fab portion only | 298V(F) 300K(S) 301P 303N(R) 330K 331V(Y) 332I 333S(P) 335P(T) 336N(L) 338D(S) 340K(N) 343N(D) 421T(S) 487Q(R) (identity: 20.0 %/38.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2r0l_C_1 identity=38.2% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCV-EKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDS-KTKNNDIALM: 349 :* ** * *** ** * ** * * **** * * * * ** * * * * : 2r0l_C_1 1:IIGGSSSLPGSHPWLAAIYIGD-SFCAGSLVHTCWVVSAAHCFSHSPPRD-----SVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLI: 94 SecStr : BS EE TTSSTTEEEEEETT-EEEEEEEEETTEEEE GGGGTT GG-----GEEEEES BTT SS EEE EEEEEE TT TTSTTTT EEE: ExpBur :bbeeeebeeeebbbbbbbbbee-ebbbbbbbeebbbbbbbebbeeebeee-----ebebbbbbbebeeeeeebbebebeeeeeeeebeeeeeeebbbbbb: Contact : b bb b bbbb bb b bb b queryA 350:KLQKP----LTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEK-GKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGP: 444 : * * * * * *** ** * * *** * * * * * * * * ** * * * *** * ********: 2r0l_C_1 95:RLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGP: 194 SecStr :EE SSS SS BTTB B TT TT EEEEEES SSSS S SB EEEEEEB HHHHTSTTTTGGG TTEEEES SSS B TT TT E: ExpBur :ebeeeeeebbeeeeebeebebbeeeeebeeeeebebbbbbbeeeeeeeebebbebbebebbbeeebebeebbbeebbeebbbbbeeeeebbbbebbebbb: Contact : b queryA 445:LVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489 :* ** * * *** ** **** * *** *: 2r0l_C_1 195:LACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR: 239 SecStr :EEEEETTEEEEEEEEEE STTT TT EEEEEGGGGHHHHHHHH : ExpBur :bbbeeeeebebbbbbbeeeebbeeeebbbbbbbbebbebbeeebe: Contact : b |