Protein Model on 2r0k_A_1_C_1 (TEMPLATE: 2r0k )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [239 aa] Hepatocyte growth factor activator :HGFA_HUMAN
2 b C 1 (H) polymer(polypeptide(L)) [213 aa] antibody heavy chain of Fab58, Fab portion only 296H 299E(H) 339S(V) 340K(N) 341T(P) 342K(S) 389E 419L(D) 461W 462G 463S(D) 467K(R) (identity: 33.3 %/38.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2r0k_A_1 identity=38.2%
queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCV-EKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDS-KTKNNDIALM: 349
                :* ** * ***  **           * **     * * ****    *             * * *             ** *    *        *  * :
2r0k_A_1      36:IIGGSSSLPGSHPWLAAIYIGD-SFCAGSLVHTCWVVSAAHCFSHSPPRD-----SVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLI: 129
SecStr          : BS EE  TTS TTEEEEEETT-EEEEEEE SSSEEEE GGGTTT   GG-----GEEEEES  BTT   SS EEE EEEEEE TT  TTSTTSS  EEE:    
ExpBur          :bbeeeebeeeebbbbbbbbbee-ebbbbbbbeebbbbbbbebbeeebeee-----ebebbbbbbeeeeeeeebbebebeebeebeebeeeeeebbbbbbb:    
Contact         :                                        b  bb                                           bbbbb       

queryA       350:KLQKP----LTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEK-GKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGP: 444
                : * *      *    * * *** **        * * ***   *     *  *  * * *     * *  **   * * * ***      * ********:
2r0k_A_1     130:RLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGP: 229
SecStr          :EE  SSS S   BTTB   B   TT    TT EEEEEES  SSSSS S  SB EEEEEEB  HHHHHSTTTTGGG  TT  EES SSS SB  TT TT E:    
ExpBur          :ebeeeeeebbeeeeebeebebbeeeeebeeeeebebbbbbbeeeeeeeebebbeebebbbbeeeebebeebbeeebbebbbbbbeeeeebbbbebbebbb:    
Contact         :                                           b                              b                         

queryA       445:LVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :*   **    * *  *** **     ****  *    ***    *:
2r0k_A_1     230:LACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR: 274
SecStr          :EEEEETTEEEEEEEEEE STTTBTTB EEEEEGGGGHHHHHTT  :    
ExpBur          :bbbeeeeebebbbbbbeeeebbeeebbbbbbbbbebbebbeeebe:    
Contact         :                bbb   b                                                                             


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