Protein Model on 1fak_B_1_D_1
(TEMPLATE: 
1fak
)Protein Model on 1fak_B_1_D_1
(TEMPLATE: 1fak
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TMPS2_HUMAN) | B 1 (H) | polymer(polypeptide(L)) [251 aa] | PROTEIN (BLOOD COAGULATION FACTOR VIIA) :FA7_HUMAN | |
| 2 | b | D 1 (I) | polymer(polypeptide(L)) [55 aa] | PROTEIN (5L15) :BPT1_BOVIN | 279H(Q) 280V(L) 281C 296H 297C 299E(D) 300K 302L(K) 340K(G) 341T 342K(T) 390K(R) 418N(P) 435D 436S 437C 438Q(K) 439G 440D 441S 460S 461W 462G 464G 472G (identity: 64.0 %/38.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1fak_B_1 identity=38.4% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDSKTKNNDIALMKL: 351
:**** * **** * * *** * * * **** * * * * * * ** * * * **** *:
1fak_B_1 1:IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKN----WRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRL: 96
SecStr : BS EE TTSSTTEEEEEETTEEEEEEEE SSSEEEE GGGGTT ----TTSEEEEES BTT S EEEEEEEEEEETT TT TT EEEEE:
ExpBur :bbeeeebeeeebbbbbbbbeeeeeebbbbbbeebbbbbbbebbeebee----beebebbbbbbbeeeeeeebbebebebbbbbeebeeeeeebbbbbbbb:
Contact : bbb bb bb b bbb
queryA 352:QKPLTFNDLVKPVCLPNPGM---MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC---NSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPL: 445
: * * * * *** * **** * * * * ** * ** * *** * *** ****** :
1fak_B_1 97:HQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKXXXSPNITEYMFCAGYSDGSKDSCKGDSGGPH: 196
SecStr :SS BTTB B HHHHHHTGGGS EEEEEES BSSTTS B SB EEEEEEEE HHHHHHHS --- TTEEEES SSSS B TT TT EE:
ExpBur :eeebeeeeebeebeebeeeebeeebbeeeebebbbbbbeeeeeeebeebbbbebbbbeeeebeeebee---eeeebebbbbbbeeeeeebbbeebbbbbb:
Contact : b b bbbbbbb
queryA 446:VTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
: * * * * *** *** *** * * ** :
1fak_B_1 197:ATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE: 242
SecStr :EEEETTEEEEEEEEEE SSSS TT EEEEEGGGTHHHHHHHHHS :
ExpBur :bbeeeeeebbbbbbbbeeebbeebbbbbbbebbbbbebbeebeeee:
Contact : bbb b b
|
[assembly_id:1]
[help]