Protein Model on 6xki_A_1_E_1
(TEMPLATE: 
6xki
)Protein Model on 6xki_A_1_E_1
(TEMPLATE: 6xki
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [378 aa] | Eukaryotic initiation factor 4A-I :IF4A1_MOUSE | |
| 2 | b | E 1 (A) | non-polymer(V6D) | (3S,6Z,8E,11S,15R)-15-amino-3-[(1E,3E,5E)-7-(dimethylamino)-2,5-dimethylhepta-1,3,5-trien-1-yl]-9,11-dimethyl-4,12-dioxa-20-thia-21-azabicyclo[16.2.1]henicosa-1(21),6,8,18-tetraene-5,13-dione | 296R 347P 348G 351D(F) 355S(N) 383F(Q) 386R(D) 516K(R) 548D (identity: 44.4 %/33.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6xki_A_1 identity=33.9% |
queryA 249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347
: * * * * * * * ** * **** * * *** * * * ****:
6xki_A_1 47:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 142
SecStr :HHHHTT EEE TT-SSHHHHHHHHHHHH TTS S EEEE SSHHHHHHHHHHHHHHTGGGT EEE---E TTS HHHHHHHHHH SEEEE H:
ExpBur :ebbbeeebbbbbbebb-bebbbbbbbbbbebbeeeeebbbbbbbbbbebbbbbbeebbeebbeebebebbb---bbbeeeeeebbeebeeeebbbbbbbb:
Contact : b b
queryA 348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447
:** * * ****** ** * * * * ** *** * ** * * * * * :
6xki_A_1 143:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 235
SecStr :HHHHHHHHTTSS TT EEEEETHHHHTSHHHHHHHHHHHTTS TT ------EEEEE S H-HHHHHHTTT SS EEE GGG S SSEEEEEEE:
ExpBur :ebbeebbeeeebeeeebebbbbbbbbebbeeebeeebeebeeebeeeb------bbbbbbbbbbe-ebbeebeebbeebeeeeeeeeebbbeebebbbbe:
Contact :b b b b b
queryA 448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547
:* ** * * * * * ** ** * * * * **:
6xki_A_1 236:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG: 287
SecStr :E--------ES------------------------GGGH--HHHHHHTHHHHTTS-----EEEEE S HHHHHHHHHHH---------HTTT EEE T:
ExpBur :b--------ee------------------------eeeb--bebbbebbebbbeb-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbb:
Contact : b
queryA 548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
:* ** * * * ** ** ***** * *** ** ** ***** ** * * ** * * *** *:
6xki_A_1 288:DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 380
SecStr :TS HHHHHHHHHHHHTTS EEEE GGGTSS TTEEEEEESS SSTTHHHHHHTTSS TT EEEEEEEEHHHHHHHHHH-----HHHHT EE:
ExpBur :ebebeebeeebeebeeeebebbbbbebbbbbbbbeebbbbbbbbbbeeebbbbbbbbbbbbeeeebbbbbbbbeeeeeebeeb-----eeebebebee:
Contact :b
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[assembly_id:1]
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