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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [372 aa] | Nucleolar RNA helicase 2 :DDX21_HUMAN | |
2 | b | D 1 (A) | non-polymer(GOL) | GLYCEROL | 308Q(D) 311K (identity: 50.0 %/35.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6l5o_A_1 identity=35.0% |
queryA 20:MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW: 119 : * * *** * * * ** *** * ** * * * * : 6l5o_A_1 20:VTFLFP--IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGR--------------------------------------------: 73 SecStr : S H--HHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHHHH SS TT --------------------------------------------: ExpBur :beebee--bbeebbeebeeeebbbbbbeeeeebbbbbbbbbbbebbeebeeeeeee--------------------------------------------: queryA 120:HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIP: 219 : : 6l5o_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 220:PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR: 319 : ** * * **** * * ** : 6l5o_A_1 73:-----------------------------------------------------------------RAPQVLVLAPTRELANQVSKDFSDITK-----KLS: 102 SecStr :----------------------------------------------------------------- SEEEE SSHHHHHHHHHHHHHH S-----SS : ExpBur :-----------------------------------------------------------------ebbbbbbbbbbeeebeebbebbeebbe-----ebb: Contact : b b queryA 320:ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS: 419 : ** * ** ** ****** * *** * **** * * * * * * *** : 6l5o_A_1 103:VACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNP-QTLLFSATC---------: 192 SecStr :EEEE SSS HHHHHHHHHH SEEEE HHHHHHHHHTT TT SEEEEETHHHHHHTT HHHHHHHHHHH S GGGS -EEEEEES ---------: ExpBur :bbbbeeeeeeeebeeebeebbbbbbbbbebbbebeeeeebebeebebbbbbbbbebbeeebbeebeebbeebbeeeeeebb-bbbbbbbeb---------: queryA 420:EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC: 519 : * ** * * * * * * * * * **** ** : 6l5o_A_1 193:------PHWVFNVAKKYMKSTYEQV-------------DLIKTAITVEHLAIKCH----------WTQRAAVIGD--VIRVYSGHQ-GRTIIFCETKKEA: 260 SecStr :------ HHHHHHHGGGS TT EEE-------------ESSTTS EEEEEEE ----------GGGHHHHHHH--HHHHHT TT- EEEEES HHHH: ExpBur :------eeebbebbeebbeeeeeeb-------------ebeeeeeebebbbbebe----------eeebbeebee--bbeeebeee-bbbbbbbeeeebb: queryA 520:DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV: 619 : * * * * **** * * * * * * ***** ** * ** * * ** ** *** * * * : 6l5o_A_1 261:QELSQ------NSAIKQDAQ----SLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFY: 350 SecStr :HHHHH------STTTGGGEE----EE TTS HHHHHHHHHHHHTTS SEEEEEHHHHTT BSEEEESS S HHHHHHHHTTB TT EEEEEEE: ExpBur :eebbe------eeebeeebe----bbbeebeeeebeebbebbeeeebbbbbbbbebbeebebbebbbbbbbbbbeebebbeebbeebebeeeebbbbbbb: queryA 620:ATEKE: 624 : *: 6l5o_A_1 351:QHKEE: 355 SecStr : GGGH: ExpBur :beebe: |