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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [420 aa] | ATP-dependent RNA helicase DDX19B :DD19B_HUMAN | |
2 | b | H 1 (B) | non-polymer(ANP) | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 270Q 272S 273G 274N(T) 371E (identity: 80.0 %/33.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6b4k_B_1 identity=33.7% |
queryA 256:VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP: 347 : * * * ** ** * * * * * *** ** * * * * * * * ** ***: 6b4k_B_1 76:LMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTP: 169 SecStr :HHHSSS EEEEE -TTSSHHHHHHHHHHHH TTS S EEEE SSHHHHHHHHHHHHHHTTT --TT EEEESTT TT S---EEEE H: ExpBur :bbbbeeeebbbbbbb-ebbbbbbbbbbbbbbebeeeeeebbbbbbbbeeebbebbbeebeebbeeb--eebebbbbbeeeeeeeeeebeeb---bbbbbb: Contact : b bbbbbbb queryA 348:GRLDDLVSTGK-LNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV: 445 :* * * * ****** ** * * * * *** * * * * ** * ** : 6b4k_B_1 170:GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYY: 262 SecStr :HHHHHHHTTT GGG EEEE HHHHTTSHHHHHHHHHHHHTS ------TT EEEEEES H-HHHHHHHHHSSS EEEEE TTEEEEE: ExpBur :bbbbebbbeeebbebeebebbbbbbbbbbbeeeebbeebbebbeebb------eebbbbbbbbeeee-ebeebbeebbeeebbbebeeeebebeebebbb: Contact : b queryA 446:VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL: 545 :* * * * ** *** * * * *** *: 6b4k_B_1 263:VLCSSRDEKF-------------------------------QALCNLYGAITIA--------QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L: 314 SecStr :EE SSHHHHH-------------------------------HHHHHHHHH S-------- EEEEESSHHHHHHH-------HHHHHHTT EE--E: ExpBur :bebeeeebbb-------------------------------ebbeebbeeeeee--------ebbbbbeeeeebeeb-------beebeeeeeebbe--b: queryA 546:HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY: 639 : * * *** * * * * ***** * *** ** * * **** *** * : 6b4k_B_1 315:SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGXXXXXGKRGLAVNMVDSK-----------------: 397 SecStr : TTS HHHHHHHHHHHHTTS SEEEEEHHHHTT S EEEESS B TTSSB HHHHHHHH ----- EEEEEEE SH-----------------: ExpBur :beebebeeebeebeebbeeebebbbbbbebbeebbeeeeebbbbbbbbeeeeeebbeebbeebbe-----eeebbbbbbbeee-----------------: queryA 640:NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD: 676 : * * * ** * * *: 6b4k_B_1 398:--------------HSMNILNRIQEHFNKKIERLDTD: 420 SecStr :--------------HHHHHHHHHHHHH EE TT: ExpBur :--------------eebebbeebeeebeeebeebbbe: |