[pdbjlvh2]Protein Model on 6b4k_A_1_F

Protein Model on 6b4k_A_1_F_1 (TEMPLATE: 6b4k )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [419 aa]	ATP-dependent RNA helicase DDX19B :DD19B_HUMAN
2	b		F 1 (A)	non-polymer(MLI)	MALONATE ION	378Q 382D 385N(I) 421K (identity: 75.0 %/34.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6b4k_A_1 identity=34.3%

queryA       256:VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP: 347
                :  *   *   *  ** **         *   *       *  *   *  *** **   * *  *    * *       *          *    ** ***:
6b4k_A_1      76:LMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTP: 169
SecStr          :HHHSSS   EEEEE -TTSSHHHHHHHHHHHH  TTS S  EEEE SSHHHHHHHHHHHHHHTTT --TT  EEEESTT    TT     S---EEEE H:    
ExpBur          :bbbeeeeebbbbbbb-bbbbbbbbbbbbbbbebeeeeeebbbbbbbbeeebbebbbeebeebbeeb--eebebbbbbeeeeeeeeeebeeb---bbbbbb:    

queryA       348:GRLDDLVSTGK-LNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV: 445
                :*   *  *  *          ******     **  *   *     *         *    ***     * *   *    *    ** *    **     :
6b4k_A_1     170:GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYY: 262
SecStr          :HHHHHHHTTT    GGG  EEEE  HHHHTTSHHHHHHHHHHHHHS ------TTSEEEEEES   H-HHHHHHHHHSSS EEEEE       TTEEEEE:    
ExpBur          :bbbbebbbeeebbebeebebbbbbbbbbbbeeeebeeebbebbeebb------eebbbbbbbbeeee-ebeebbeebbeeebbbebeeeebebeebebbb:    
Contact         :                                b   b  b                                   b                        

queryA       446:VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL: 545
                :*                                         *   * *     **      ** *** *      *            * ***     *:
6b4k_A_1     263:VLCSSRDEKF-------------------------------QALCNLYG-----AIXXA---QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L: 314
SecStr          :EE SSHHHHH-------------------------------HHHHHHHT-----T -- --- EEEEESSHHHHHHH-------HHHHHHTT   EE--E:    
ExpBur          :bebeeeeebb-------------------------------ebbeebbe-----ee--e---ebbbbbeeeebbeeb-------beebeeeeeebbe--b:    

queryA       546:HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY: 639
                : *      *    ***  *    *  * * *****   *  ***  **  *        * ****        ***   *                    :
6b4k_A_1     315:SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGXXXXXGKRGLAVNMVDSK-----------------: 397
SecStr          : TTS HHHHHHHHHHHHTTS SEEEEEHHHHTT    S  EEEESS  B TTSSB HHHHHHH  -----   EEEEEEE SH-----------------:    
ExpBur          :bbebebeebbebbeebbeeebebbbbbbebbeebbeeeeebbbbbbbbeeeeeebbbebbeebbe-----eeebbbbbbbbee-----------------:    

queryA       640:NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD: 676
                :                *  *  * ** *  *     *:
6b4k_A_1     398:--------------HSMNILNRIQEHFNKKIERLDTD: 420
SecStr          :--------------HHHHHHHHHHHHH    EE  TT:    
ExpBur          :--------------ebbebbeebeeebeeebeebebe:

Protein Model on 6b4k_A_1_F_1 (TEMPLATE: 6b4k )

Input Residue Numbers for Focused Sites