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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [202 aa] | DEAD-box ATP-dependent RNA helicase CshA :CSHA_STAAR | |
2 | b | B 1 (A) | non-polymer(AMP) | ADENOSINE MONOPHOSPHATE | 4F 22W(F) 24L(E) 25P 26T 29Q 48T 49G 50S(T) 51G 52K 53T 305N(Q) (identity: 69.2 %/37.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6aic_A_1 identity=37.1% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* * * * * * ** ** *** * * * * * ** ****** ** * * : 6aic_A_1 4:FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKV---------------------------------------: 64 SecStr :HHHHT HHHHHHHHHTT S HHHHHHHHHHHTT EEE TTS HHHHHHHHHHHHH---------------------------------------: ExpBur :beebebeeebbebbeeeeeeebeebbeebbeebeeeebbbbebeeeeebbbbbbbbbbeeb---------------------------------------: Contact :b b bbb b bbbbbb queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 6aic_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP------KALIVEPSRE: 297 : ** * **: 6aic_A_1 65:------------------------------------------------------------------------------------VGKQGVQSLILAPTRE: 80 SecStr :------------------------------------------------------------------------------------TT S EEEE SSHH: ExpBur :------------------------------------------------------------------------------------eeeeebbbbbbbbeee: queryA 298:LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD: 397 :** * * ** * * * ******** * * * ***** * * ** * : 6aic_A_1 81:LAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV---: 174 SecStr :HHHHHHHHHHHHTT---TS EEEE SSS HHHHHHHHTT SEEEE HHHHHHHHHTT S TT EEEEESHHHHHHTT HHHHHHHHHHS T---: ExpBur :bbeebbeebeebbe---eeebebbebbeeeebeebbeebeeebbbbbbbbebbbebbeeeebebeebebbbbbbbbebeeeeeeeebeebbeebeee---: Contact : b queryA 398:GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV: 429 : * *** * * * : 6aic_A_1 175:--QRQTMLFSATMPK-AIQALVQQFMKSPKII: 203 SecStr :--T EEEEE S H-HHHHHHHHHSSS EEE: ExpBur :--ebbbbbbbeeeee-ebebbbeebbeebeeb: |