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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [207 aa] | Heat resistant RNA dependent ATPase :Q72GF3_THET2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [365 aa] | Heat resistant RNA dependent ATPase :Q72GF3_THET2 | 6E(D) 8G(P) 30A 31E(A) 34P 35L 38G(E) 425F(N) 427T(V) 428W(L) 429V(I) 430D(N) 431L(V) (identity: 23.1 %/37.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4kbg_A_1 identity=37.1% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* *** * ** *** ** * * * * ** *** ** * * * * * : 4kbg_A_1 3:FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPS---QERGRKPRALVLT--------------------: 79 SecStr :GGGS HHHHHHHHTTT S HHHHHHHHHHHTT EEEE TTSSHHHHHHHHHHHH --- TT SEEEE --------------------: ExpBur :beebebbeebbebbeeeeeeebeebbeebbeebeeeebbbbbbeeeeebebbbbbbbbeebeee---eeeebebbbbbbb--------------------: Contact : b b bb bb b queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 4kbg_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303 : * ** * **** * : 4kbg_A_1 73:-----------------------------------------------------------------------------------PRALVLTPTRELALQVA: 89 SecStr :----------------------------------------------------------------------------------- SEEEE SSHHHHHHHH: ExpBur :-----------------------------------------------------------------------------------bbbbbbbbeeebbeebb: queryA 304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403 : * * ** * * * * ** **** * * * ** * ****** ** * * * : 4kbg_A_1 90:SELTAV-----APHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSR------QT: 178 SecStr :HHHHHH----- TTS EEEE SSS SHHHHHHHHH SEEEE HHHHHHHHHTT S TT EEEEESHHHHHHHT HHHHHHHHHHS TTS------EE: ExpBur :eebeeb-----bebbebbbbbeeeeeeebeebbeebbbbbbbbbebbbbbeeeebbebeebebbbbbbbbebeeeeeeeebeebbeebeeeb------bb: queryA 404:IVCSATLHSFDVKKLSEKIMHFPTWVDL: 431 : **** * * * * * * : 4kbg_A_1 179:LLFSATLPSW-AKRLAERYMKNPVLINV: 205 SecStr :EEE SS HH-HHHHHHHH SS EEEE : ExpBur :bbbbeebeeb-beebbeebbeeeeebee: Contact : b bbbbb |